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MEL_C3_43_13

Organism: MEL.C3

partial RP 36 / 55 MC: 3 BSCG 39 / 51 ASCG 0 / 38
Location: 6129..6794

Top 3 Functional Annotations

Value Algorithm Source
nusB; transcription antitermination protein NusB similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 225.0
  • Bit_score: 128
  • Evalue 1.90e-27
nusB: transcription antitermination factor N (db=HMMTigr db_id=TIGR01951 from=3 to=216 evalue=2.4e-34 interpro_id=IPR011605 interpro_description=NusB antitermination factor GO=Biological Process: transcription termination, DNA-dependent (GO:0006353)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.40e-34
(db=HMMPfam db_id=PF01029 from=114 to=213 evalue=6.4e-31 interpro_id=IPR006027 interpro_description=NusB/RsmB/TIM44 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.40e-31

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Taxonomy

Clostridium sp. CAG:306 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGCAAGCACGACATGCCGCAAGGGAATTAGCTTTGATAGTATTTTCACAATGTCCTGAAAATATTTCAAAACTAGATAAAGAAAATTATACTGATATTTTATTAAAATCAGTAAGAACATTAACAAATAATGCAACATCCGAGTTAAAGGTTGCAACCAGTTGTTTTTTTGAAATACGTGATTTTCTGGAACAATATGAAAATAACCATGAAGATAATATAAAACGACCGATAGGCACCCATAATATTGAAGTACCATTGCCTACAACGTTGGATATGAGGGAAAAGTTAGATGATTTGATAAATGTTTCTGATAAAGCCATGATGGCGTTGGAAATAGCTGAAATGAGCGTGTTGGAAGAAAAAGAAGAAGTTCGTGATTATATTATTAAACTTGCTTTAAATTATCGTGAAAATAAAAATGAAATCGACGGGTTAATTAAAAAATATGCTTATGGGTGGAATATTGAACGTTTGGTTAAAATAGATAAGGATATTTTAAGAATAGCTATTTGTGAACTTGTTTATATAAAGGATGCTCCTGTTAAAGTTACTGTTGATGAAGCTATTGAACTTGCTAAAAAATATTCAACAGGTGATAGTGCTTCATTTATTAACGGTATTTTAGGAAGTGTTATTTCGGAATATAACTTAAAATCTAAGTAA
PROTEIN sequence
Length: 222
MQARHAARELALIVFSQCPENISKLDKENYTDILLKSVRTLTNNATSELKVATSCFFEIRDFLEQYENNHEDNIKRPIGTHNIEVPLPTTLDMREKLDDLINVSDKAMMALEIAEMSVLEEKEEVRDYIIKLALNYRENKNEIDGLIKKYAYGWNIERLVKIDKDILRIAICELVYIKDAPVKVTVDEAIELAKKYSTGDSASFINGILGSVISEYNLKSK*