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MEL_C3_35_5

Organism: MEL.C3

partial RP 36 / 55 MC: 3 BSCG 39 / 51 ASCG 0 / 38
Location: comp(3567..4451)

Top 3 Functional Annotations

Value Algorithm Source
AraC-type DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 286.0
  • Bit_score: 292
  • Evalue 1.80e-76
(db=HMMPfam db_id=PF06719 from=24 to=178 evalue=4.4e-40 interpro_id=IPR009594 interpro_description=Transcription regulator HTH, AraC, N-terminal) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.40e-40
no description (db=HMMSmart db_id=SM00342 from=205 to=288 evalue=5.0e-19 interpro_id=IPR018060 interpro_description=Helix-turn-helix, AraC type, DNA binding GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.00e-19

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Taxonomy

Clostridium sp. CAG:967 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTGGAATCAAAATATACTTTAATAAGAGATATAATTATAAGAAATATCTCTAAAGCCGGGAATTATCCGACTTCTATTAATGGAGTAAGAATAGTGAGACGGGACGAACCCACAGATTTTGAAAGATGTTTTTATAATTACACCTGTATTTTTGTTTTGCAAGGGAAAAAACAAATGATTTTCGGCTCAAACGCAAACACATATAAAAAGGGACAATATGTTCTTTCCTGTGCAGATATTCCTGCGATTTGCCGTGTTGAAGAGGCTTCCAGTGACAAACCTTTTGTCGGAATTCTTTTGCAATTTGATTCTACAATGATGACTCGGCTTATTTTAGAAACGAAACAACAAAAGCCTCTATCTTTCGAAAACAAATATCTTGCAGTTGCTGATTCTGACGAAGAATTGACCGATGCGTTTTATCGCCTCTCACAACTAATTGAAAAGTCTGAGTCAGAACAGGAGATTATGTCGCCAATTATTATAAAAGAAATTTACTATAGACTTCTTATTGGTCCACTTGGAAATCAATTACGTTTGATTAATACTAAAGGTTCTCGTTCAAATCAAATTGCACAGGCAATTTCCATAATAAAACAACGGTATATTGAAAAACTTAATATGGATGAACTTGCCTTGAGTGTTAATATGGCACCATCATCATTTTATAGAAATTTTAAAAAAGTTACACAAGTCAGCCCTTTGCAGTATCAAAAACAGCTAAAATTGAATGAAGCACAAAGATTAATGCTATCAGGTAATTATGATGCAGCAACAGCTAGTTATGAGGTAGGTTACGAAAGCCCAACACAATTTAGCCGCGAATATAAAAAAATGTTTGGTAACCCGCCTAAGACTGATGTTAAAAATTTGATCACAGCTTAA
PROTEIN sequence
Length: 295
VESKYTLIRDIIIRNISKAGNYPTSINGVRIVRRDEPTDFERCFYNYTCIFVLQGKKQMIFGSNANTYKKGQYVLSCADIPAICRVEEASSDKPFVGILLQFDSTMMTRLILETKQQKPLSFENKYLAVADSDEELTDAFYRLSQLIEKSESEQEIMSPIIIKEIYYRLLIGPLGNQLRLINTKGSRSNQIAQAISIIKQRYIEKLNMDELALSVNMAPSSFYRNFKKVTQVSPLQYQKQLKLNEAQRLMLSGNYDAATASYEVGYESPTQFSREYKKMFGNPPKTDVKNLITA*