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SCNpilot_solid_1_scaffold_2351_2

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(256..510)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 84.0
  • Bit_score: 163
  • Evalue 1.00e-37
DNA-directed RNA polymerase subunit omega n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362D5A2 similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 84.0
  • Bit_score: 163
  • Evalue 9.60e-38
rpoZ; DNA-directed RNA polymerase, subunit K/omega similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 84.0
  • Bit_score: 160
  • Evalue 1.70e-37

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCCGGAACGAACCAGGGCATCATCGAGCCCCCCATCGACAGTCTGCTGCAGAAGGTCGACTCGAAGTACCAGCTCGTGATCTACGCGGCCAAGCGTGCGCGCCAGATCAACGACTACTACTCGGATCTGCACGAGGGCAACCTGTTCGACAACGTCGGCCCGCTCGTGGACTCGACCGTCGAGGACAAGCCGCTGACCATCGCGCTGCACGAGATCCACGAGGACAAGCTGCGCCTGCGCCCGGCCGAATAG
PROTEIN sequence
Length: 85
MAGTNQGIIEPPIDSLLQKVDSKYQLVIYAAKRARQINDYYSDLHEGNLFDNVGPLVDSTVEDKPLTIALHEIHEDKLRLRPAE*