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SCNpilot_solid_1_scaffold_2931_1

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 3..782

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003180172 similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 193.0
  • Bit_score: 292
  • Evalue 5.50e-76
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KHK99639.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 198.0
  • Bit_score: 284
  • Evalue 1.60e-73
sigma-70 region 2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 197.0
  • Bit_score: 217
  • Evalue 3.70e-54

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 780
GAGCTGAGGACGAATTCCGAGGCGCGGCATCCGCATTTCGTGAGATCCCCTCGGCCCGTGAGCGGATGCCGCGGGCGCAGGCTCCCGCGCTCATCGGCGTCTGGCCGGCTGGCGTATCAGACGCCGGACTTTCGTCCTCTGCCTGTTGTGGACACAATTGTCGATGTGACATCCCTCGATGACGCTGCCGCGGATGCCGCGCCCGCAGACCCGACGCGCTGGGAGCGTGCCGGTGCGCTGTTCGCCGCCTGGCGCGACGGCGACACTCGCGCGATGGACGACCTCGTGCGCCTGATGACGCCGACGCTCTGGCACGTCGTGCGCGCCTATGGCGTCGACGCCGCCCTCGCGGAGGACGTCGTGCAGACGACGTGGCTGACTCTCGTGCGGCGGCACCGCACGATCAGCGATCCGCGGGCGGTGTCGGGGTGGCTCACGACCTGTGCCCGGCGGGAGGCCTGGCGCGTCTCCCGCGCGCACCGGCGCGCAGAGGCCACCGACGACGAACAGCTCGAACAGCAGTTGCCGGTGGCCGAGTCGGCCGAGGCCTCGGCCACCCGCAGCGACGAGGCGCATCGGCTGTGGTCTGCCGTCGCTCAACTCGCCGAGCGCTGCCGCCGCCTGCTGCGGGTGGTCGCGTTCGATGACCGGCCCGACTACGCACGGATCGCGCGGGACATGTCCATGCCGATCGGGTCGATCGGCCCGACCCGGCAGCGGTGCCTGGCCAAGCTGCGGACGCTGCTGGGCGACGAGGGGGCGATCGCTCATGGCGCCTGA
PROTEIN sequence
Length: 260
ELRTNSEARHPHFVRSPRPVSGCRGRRLPRSSASGRLAYQTPDFRPLPVVDTIVDVTSLDDAAADAAPADPTRWERAGALFAAWRDGDTRAMDDLVRLMTPTLWHVVRAYGVDAALAEDVVQTTWLTLVRRHRTISDPRAVSGWLTTCARREAWRVSRAHRRAEATDDEQLEQQLPVAESAEASATRSDEAHRLWSAVAQLAERCRRLLRVVAFDDRPDYARIARDMSMPIGSIGPTRQRCLAKLRTLLGDEGAIAHGA*