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SCNpilot_solid_1_scaffold_7831_8

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 6116..6889

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerD n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003803AC7 similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 258.0
  • Bit_score: 412
  • Evalue 3.60e-112
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 257.0
  • Bit_score: 412
  • Evalue 3.90e-112
xerD; site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 260.0
  • Bit_score: 376
  • Evalue 4.70e-102

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Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 774
GTGACGGACAGCGCCCAGGTGACGGCGGCCATCGTCGGCGCGTTCGTCGCCGAGCGGTCCGCGGCAAGTCCCCGGCCTGCGGCATCCAGCCTCGCCCGCCTGCAGTCCTCGGTACGCGGACTGCACAGATTCCTGCAGCGAGAACAGATCGACGCGGAGGACCCGACGGCTCGGCTGCGACCGCCCAAGCTGCCGCAGCGGCTGCCGAAGGCGCTGACCATCGACCAGGTGGAGCGGCTGCTTGCGGCACCCGCTCCCGACGAGCCCCTGGGCCTGCGCGACCGGGCCCTGCTCGAGCTGCTGTACGCCACCGGCGCGCGCGTCTCCGAGATCGTGCAGCTGGACGTCGACGATGTCACGCGCGGCGACGTGCTGCGTGTGCGCGGGAAGGGATCGAAGGAACGCATCGTGCCGATCGGGCAGTACGCCCGTGAGGCGCTGGACGCGTATCTCACCCGGGTACGCCCGGAGCTGTCGCGGCGAGGCAAGGCGACACCCCGACTGTTCCTCGGCGCGCGGGGGGCACCGTTGTCCCGGCAGAGCGTCTGGCTGGTCATCCAGGCGGCGGCGCAGGGCGCGCAGTTGACCGCGCACGTGTCGCCGCACACCCTGCGGCACTCGTTCGCCACGCATCTGCTGCAGGGTGGCGCCGATGTGCGGGTCGTGCAGGAGCTGCTCGGGCACGCCTCGGTCGCGACCACGCAGATCTACACGCACGTGAGCGTCGACGCACTGCGCGACGTCTACGTGACCTCCCATCCGCGGGCGCGGTGA
PROTEIN sequence
Length: 258
VTDSAQVTAAIVGAFVAERSAASPRPAASSLARLQSSVRGLHRFLQREQIDAEDPTARLRPPKLPQRLPKALTIDQVERLLAAPAPDEPLGLRDRALLELLYATGARVSEIVQLDVDDVTRGDVLRVRGKGSKERIVPIGQYAREALDAYLTRVRPELSRRGKATPRLFLGARGAPLSRQSVWLVIQAAAQGAQLTAHVSPHTLRHSFATHLLQGGADVRVVQELLGHASVATTQIYTHVSVDALRDVYVTSHPRAR*