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SCNpilot_solid_1_scaffold_6735_3

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(2426..2983)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T6R4_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 183.0
  • Bit_score: 134
  • Evalue 8.00e-29
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERK73168.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14 similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 183.0
  • Bit_score: 134
  • Evalue 1.10e-28
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 30.7
  • Coverage: 179.0
  • Bit_score: 97
  • Evalue 3.10e-18

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Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCTCCGGACAAGCGCCGCGCGATGATCGCCGAGCAGGCGGTGCCGCTGTTCCTCGAGCACGGCGCCGCGCTGACCACCCGTCAGCTGGCTGAGCACCTCGGACTCGCCGAGGGGACCATCTTCCGCGCGTTCGGCGACAAGGACTCGCTCATCCGCGCTGCCGTCGAGGCGTTCTTCGCGCAGGGGCGCGCGCGGATGACCGAGGGGCTCGTCGATCCCGCGCTGCCGCTGGATGAGAAGGTCGCGGCCCTCGTCACCGGCATGCGCACCTGGACGAGCTCGATGATGAGGATGCTGTCGCTGGTGGACCGCGAGGACATCCCGCACTTCCTGTCCGGTCCGCGCGACGGCACCTATCGCGCGGCCATCGCCGCGGTGTTCGCCCCCGACGCCGCCGAGCTCGCGCTGCCGCTCGAGCGACTCGGATCGATCATGCGGATCGCCGGGATCGCCGCCAACGCCGCCCGGGTCGACGAGCAGGCCGGGCTCACCGACGACGAGCTCGTCCACTTCATCCTCTACGGCATCGCGGGCGTCCCCCGCGGAAAGGACTGA
PROTEIN sequence
Length: 186
MAPDKRRAMIAEQAVPLFLEHGAALTTRQLAEHLGLAEGTIFRAFGDKDSLIRAAVEAFFAQGRARMTEGLVDPALPLDEKVAALVTGMRTWTSSMMRMLSLVDREDIPHFLSGPRDGTYRAAIAAVFAPDAAELALPLERLGSIMRIAGIAANAARVDEQAGLTDDELVHFILYGIAGVPRGKD*