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SCNpilot_solid_1_scaffold_7580_3

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 1569..2213

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289BE12 similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 211.0
  • Bit_score: 134
  • Evalue 1.60e-28
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:EAR23900.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.9
  • Coverage: 206.0
  • Bit_score: 129
  • Evalue 7.10e-27
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 206.0
  • Bit_score: 118
  • Evalue 2.50e-24

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Taxonomy

marine actinobacterium PHSC20C1 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGCAGGAGATCACACCCCCCGGTCTGCGCGAACGCAAACGGCAGCAGACCCGGCGACGCCTCGAGCAGGCAGCCGTCGCGATCGTGGCCGAAGAGGGGCTCGACCGGCTCACGATCGACGCCCTCAGCGAGCGTGCCGACGTCTCGCCGCGCACCTTCTTCAACTACTTCGACAGCAAGGAAGACGCCATCCTCGGGCTGCGCACCGCCGGTGACACCGAGCGCATGGTCGAGACGATCGTCGCCGAGCTGCCGCCGGCTCCCCTCGTCGACAACGTGATCGACATGCTCATCCGCGTGAGCGACAACGCCATGCTCGACCACGAGCTGCGCGAGCGCCGCCGCCGCATCCTGCACCAGCATCCCGAACTGCTCGGCCGCCACTTCGGGCACATGGGGCGGATGCTGGGGCCGCTGACCGGCGGCGTGCGTGCGCTGATGACCCGCGACCATGCGGAGCAGGATGCTGCGGCCGATGCCACCGCCCACGCCCAGATCACGCTGATGATGTGCGGCGCGGCCCTGCGCGCGGCGATGGGCGAGCTCATGCGCGCGCATGCCGACCTGTCCACCGATCAGTCCCTCGCGCTGCTGCACACCCGAACAGCCGCGCTCGTTCAAGAAACCATCGAAAGGCTCGCATGA
PROTEIN sequence
Length: 215
VQEITPPGLRERKRQQTRRRLEQAAVAIVAEEGLDRLTIDALSERADVSPRTFFNYFDSKEDAILGLRTAGDTERMVETIVAELPPAPLVDNVIDMLIRVSDNAMLDHELRERRRRILHQHPELLGRHFGHMGRMLGPLTGGVRALMTRDHAEQDAAADATAHAQITLMMCGAALRAAMGELMRAHADLSTDQSLALLHTRTAALVQETIERLA*