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SCNpilot_solid_1_scaffold_8833_9

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 4401..4604

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 68.0
  • Bit_score: 134
  • Evalue 5.40e-29
DNA-directed RNA polymerase subunit alpha n=1 Tax=Microbacterium sp. B19 RepID=UPI000345F016 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 68.0
  • Bit_score: 136
  • Evalue 1.30e-29
rpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit similarity KEGG
DB: KEGG
  • Identity: 97.1
  • Coverage: 68.0
  • Bit_score: 134
  • Evalue 1.40e-29

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 204
GTGCTCATTGCACAGCGTCCCACTCTGACCGAGGAGAAGATCGGGGAGTTCCGCAGCCGCTTCGTCATCGAACCGTTGGAGCCCGGCTTCGGCTACACGATCGGCAATGCGCTGCGCCGCAGCCTCCTGTCGTCGATTCCCGGAGCGGCGGTCACCAGCATCCGCATCGACGGCGTCCTCCACGAGTTCAGCACCATCCCCGGT
PROTEIN sequence
Length: 68
VLIAQRPTLTEEKIGEFRSRFVIEPLEPGFGYTIGNALRRSLLSSIPGAAVTSIRIDGVLHEFSTIPG