ggKbase home page

SCNpilot_solid_1_scaffold_12298_2

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: 852..3281

Top 3 Functional Annotations

Value Algorithm Source
RNA helicase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037ACB69 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 832.0
  • Bit_score: 1265
  • Evalue 0.0
superfamily II RNA helicase similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 827.0
  • Bit_score: 1248
  • Evalue 0.0
RNA helicase {ECO:0000313|EMBL:KEP75662.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 827.0
  • Bit_score: 1248
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2430
GTGAGCGGACCCGGCCCCGCGCAACGCTACGCGAACGCCCGCGCCGATCGCCGGCATCCCCTCACCGCGGATTTCGCGGCAGCGCAGCGGTTCGACCTCGACGATTTCCAGGTGGCGGCCTGTCATGCGCTCGAGGACGGTGACGGCGTGCTCGTGGCCGCGCCCACGGGCGCGGGCAAGACCATCGTCGGGGAGTTCGCCGTTCACCTGGCGATGCGCGAGAGCACCGACAAGGCGTTCTACACCACGCCGATCAAGGCGCTGTCGAACCAGAAGTTCCGCGAGCTCGTCGATGTGTACGGTCCCGACGAGGTCGGGCTGCTCACCGGGGACATCAGCATCAACGGCGGCGCCCGCATCGTGGTGATGACCACCGAAGTGCTGCGCAACATGCTGTACGCCGACTCGGGTGCACTGCGCGGTCTGCGCTTCGTCGTGATGGACGAGGTGCACTACCTGGCCGATCGGTTCCGCGGCGCGGTGTGGGAAGAGGTGATCATCCACCTGCCGCACGCGGTCAAGCTCGTCTGCCTGTCGGCGACGGTCTCCAACGCCGAGGAGTTCGGCGACTGGCTGGGCACGGTCCGAGGCGATACCGAGGTCATCGTGTCCGAGACCCGACCAGTGCCGCTAGAGCAGCACGTGCTGGTGCGCGACGACCTGCTTCCCCTGTTCGACGACAGGGCGGGCGCGGCGACGGCACGGGTCAACCAGGAGCTCATGCGAATCCGCTCGTCGACGGGTGCCGCCTATGAGCGCAACCGCCGCCCCTACCGCAGCCGCAGGCCGGTGCGACCGGCCCGGGTGCGGCACATCGAGCGGATGGACCGTCCCGATGTCGTGCTGCTCCTGGAGCGCGACCGACTGCTGCCGGCGATCTTCTTCATCTTCAGCCGCGTGGGCTGCGAGGCCGCCGTGCAGAAGCTGCGTCGCGCGGGAGTGCGCCTGACCTCGCGCGAGGAGCGCGACCAGATCCGCGCGATCGTCGACGAGCACACCCGCACGCTGCACGACGAGGATCTCGGCGTGCTGGGATTCTGGGAGTGGAAGGACAACCTCGAACGCGGCGTCGCCGCCCACCACGCCGGCCTCCTGCCGGTGTTCAAGGAGGTCGTCGAGGAGCTGTTCCAGCGCAAGCTCGTCAAGGTCGTCTTTGCGACGGAGACGCTCGCGCTGGGCATCAACATGCCCGCTCGCACAGTGGTGCTCGAGAAGCTGGAGAAGTTCAACGGCGAAGCGCGCGTGGCGATCACGTCGGGGGAGTACACGCAGCTCACCGGCCGTGCCGGCCGTCGTGGCATCGACGTCGAAGGACACGCGGTGGTGCAGTGGACCGAGGGCATGGATCCGCAGTCCGTCGCGGCCCTCGCCTCCCGGCGCACCTATCCGCTGAACTCCAGCTTTCGTCCCACGTACAACATGGCCGCGAACCTCATCGACCAGTTCGGGCGCGCACGGGCGCGGGAGATCCTGGAGAGCTCGTTCGCTCAGTTCCAGGCGGATCGGTCGGTCGTGGGCCTGGCGCGACAGGTGCGCGAGCAGGAGGAGTCTCTCGGCGGCTACGCAACGGCCATGACCTGTGACCGTGGCGATTTCGTCGAGTACTCCGGCATCCGTCGCGAGCTCAGCGATCTGGAGAAGCTGAACCGGAAGGACGGCGCCGCCTCGCACGCGACCCGCCAGAAGCGCCAACGGCAGATCCAGGTGCTGCGCCGCCGCATGCAGCGCCACGCCTGCCATTCCTGTCCCGACCGTGAGACCCACGCGCGATGGGCGGAGCGGTATTGGAAGCTCACCCGCACCACGGAGCGCCTCAGACACCAGATCGAGACGCGCACGGGAACGGTGGCTCGTCAGTTCGACCGCGTCGTCGATGTGCTGGCCGCGCTCGACTACGTGCGTGTGGGGGCGGACGGCCGAACCACCCTGACGCCGGCAGGCGAGACGATGCGGCGCATCTACGGAGAACGCGACCTGCTCGTGGCGGAGGCTCTGCGCACGCAGATCTGGCGCCAGCTGGACGCGGCGTCTCTGGCGGCGCTCGTGTGCTGCCTGGTCTACGAGCCACGGCGCGATGAGGCACCCGCGGGAGAGCGCGGGCTGCCCCGGGGAGCGTTCCGGCTGGCACTTGCCGACACGCAACGGCTGTGGGCCGTGCTGGACGACGTCGAGCATGACCACCAGCTGCCGGGCACCGGCGAGGTGGCGACGGGCCTGGCGCAGGCCATGCACGCGTGGGCGCGCGGCGCGACGCTGGATCGCGTGCTCGCCGACGCTGACATGGCCGCCGGCGACTTCGTACGGTGGGCGAAGCAGACCATCGATCTGCTGGACCAGCTCACTCTCGTCGCCGACCGCCCGCTGGCGGCGGTGGCACAGAAGGCACGGGATGCCGTGCGCCGGGGGATCGTCGCGTACTCGTCGGTCTGA
PROTEIN sequence
Length: 810
VSGPGPAQRYANARADRRHPLTADFAAAQRFDLDDFQVAACHALEDGDGVLVAAPTGAGKTIVGEFAVHLAMRESTDKAFYTTPIKALSNQKFRELVDVYGPDEVGLLTGDISINGGARIVVMTTEVLRNMLYADSGALRGLRFVVMDEVHYLADRFRGAVWEEVIIHLPHAVKLVCLSATVSNAEEFGDWLGTVRGDTEVIVSETRPVPLEQHVLVRDDLLPLFDDRAGAATARVNQELMRIRSSTGAAYERNRRPYRSRRPVRPARVRHIERMDRPDVVLLLERDRLLPAIFFIFSRVGCEAAVQKLRRAGVRLTSREERDQIRAIVDEHTRTLHDEDLGVLGFWEWKDNLERGVAAHHAGLLPVFKEVVEELFQRKLVKVVFATETLALGINMPARTVVLEKLEKFNGEARVAITSGEYTQLTGRAGRRGIDVEGHAVVQWTEGMDPQSVAALASRRTYPLNSSFRPTYNMAANLIDQFGRARAREILESSFAQFQADRSVVGLARQVREQEESLGGYATAMTCDRGDFVEYSGIRRELSDLEKLNRKDGAASHATRQKRQRQIQVLRRRMQRHACHSCPDRETHARWAERYWKLTRTTERLRHQIETRTGTVARQFDRVVDVLAALDYVRVGADGRTTLTPAGETMRRIYGERDLLVAEALRTQIWRQLDAASLAALVCCLVYEPRRDEAPAGERGLPRGAFRLALADTQRLWAVLDDVEHDHQLPGTGEVATGLAQAMHAWARGATLDRVLADADMAAGDFVRWAKQTIDLLDQLTLVADRPLAAVAQKARDAVRRGIVAYSSV*