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SCNpilot_solid_1_scaffold_13349_1

Organism: SCNPILOT_SOLID_1_Microbacterium__7

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38 MC: 1
Location: comp(3..2180)

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugative relaxase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W624_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 726.0
  • Bit_score: 985
  • Evalue 3.80e-284
Conjugal transfer protein {ECO:0000313|EMBL:EXJ52921.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 726.0
  • Bit_score: 1269
  • Evalue 0.0
TrwC relaxase similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 728.0
  • Bit_score: 961
  • Evalue 1.30e-277

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2178
GTGTCGGTTTCGATGCGGGTCATGGGCGCGGAGGATGGCTACAAGTACCTGCTGCGCACCGTGGCGTCCGCCGACGGTGAGCGGGCGCTCTCGACGCCACTGACCCGCTACTACGCCGAGCAGGGCACCCCGCCCGGCCGGTGGATGGGCAGCGGCCTGGCCTCGCTTGGGCACGGCGAGGTCCACGAGGGCGCGCAGGTATCCGAGGCGCAGCTCCAGCTCCTGCTCGGCATGGGCCTCGATCCGGTGACGGGCGATCCGTTGGGGAAGGCGTATCCGGTGTTTCCCAGTGTCGAGGATCGGATCGCGGGACGGCTCGCCCGGCTCGACCCGGCGCCGGGCGCGGCGGAGCGTGCCGAGGTGGTCGCGGTGATCGAGGCGGAGGAATCGGCGCGCAAGTCGCGGCGCGCGGTCGCGGGGTTTGACTTCACGTTCTCGCTGCCGAAGTCCGCATCGGTGCTTTGGGGGGTTGCGGACGCGGCGACCCAGGCGCGAATTGCCGAGGCGCACCATGCGGCCGTTGCGGAGGTCGTCGCGTTCATGGAGCGGGAGGTTGCGGCGACGCGCTCGGGCGCAACCTCGCGCGACGGCGCGGTTGCACAGGTGGAGGTGAGGGGGCTGATCGCCACGGCGTTCGATCATTTCGACTCGCGGGCGGGTGATCCTCAGTTGCACACGCATGTCGTGGTGAGCAACAAGGTGCGCACCCTATTCGACGGCAAGTGGCGGTCGCTGGATAGCCGGCCGCTGCACGCGGCGACCGTGGCGCTGAGCGAGCTGCACAATGTGATCTTCGCCGACCACCTCACCCGCGCGCTCGGTGTCGGCTGGGAGCGGCGCGACCGGGGAGCCCACCGCAACCCGGTGTGGGCAGTCGCCACGGTGCCGGAGGAGTTGGTCGCGGAGTTCTCGTCGCGTTCCCGGCACATCGACATAGAGAAGGACCGACTGATCGCCGAGTACGAGGCCGCGCACGGGCATGCACCGTCGCGGGAGACGATCATCCGGCTGCGGCAGCAGGCGACACTGGCAACCCGGCCCGACAAAGAAGTCCGGCCGCTGGCCGACCTCACCCAGGAGTGGCGCACCCGCGCGAGCCGACTGCTGGGCCGTGACGCAACCGAATGGGCGCGAGAGGCCGTCGCAGCGGAGCGCGTCGAGCTGCTGCGCGCGGAGGACGTGCCGCTGGAGCGGATCGCCAGGCTCGGAGCGGCGGTGGTCGCCGCAGTCGCGGAGAAGCGGACGACGTGGACCCACTGGAACCTCTACGCGGAGGCCGCACGGCGGACGATGGGCTGGCGCTTCGCCGCCACCGAGGACCGCGACGCGATCACGGGGATGATCGCGGACGCCGCGGAGCAGGCATCCATCCGGCTCACCCCGCCTGAGCTGGCCTCCAGTCCCGGCGCGTTCCAGCGCGCGGACGGGACGAGCGTGTTCCGGCTCCGCAATGCCGCCCGCTACAGCGGTGCCGCGGTGCTCGCCGCCGAGGACCGGCTACTTGCGCGCTCCCACGAGCAGGTTGCGCCGCGCTTGGCCGACGCAATCGTCGCGCACGCGCTGCAACCCCACCGTGGGCGCGCGCTCGGCGACGACCAGCGCGCCGCACTCACCGCGATTGCGTCGTCGGGTCGGGTACTCGACCTGCTCGTCGGCCCTGCGGGGGCGGGGAAGACCACCGCGCTGCGCGCGCTGCGGCGTGCGTGGGAGGCCGAGCACGGGCGCGGCGCGGTCGTCGGTCTGGCACCGTCCGCGGTCGCGGCCGAGGTGCTGGCCGGTGACCTCGGCATCCCGACGGAGAACACCGCGAAGTGGTGGCAGACCCACCGCGACCGCGGCACCGGGTTCACCGCCGGGCAGCTCGTGATCGTGGACGAGGCATCCCTCGCCGGGACGCTCGCGCTCGACCGGCTCGTGCGCGTCGCAGCCGACGCCGGAGCGAAGGTGCTGCTCGTGGGCGATCCCGCGCAACTCCAGTCCGTCGACGCCGGGGGAGCGTTCGGGATGCTCGTCGCCGACCGTGCCGACGTGCCCGAGTTGACCGACGTGCGCCGCATCACCGCAGCCTGGGAGAAGGGTGCCACCCGCGATCTACGCAACGGCCGCATCGAAGCCATCGACACCTACCAGGCGCACGGTCGTATCCGGGCGGGCGAAACCGAGCGCATGGCCGACGCC
PROTEIN sequence
Length: 726
VSVSMRVMGAEDGYKYLLRTVASADGERALSTPLTRYYAEQGTPPGRWMGSGLASLGHGEVHEGAQVSEAQLQLLLGMGLDPVTGDPLGKAYPVFPSVEDRIAGRLARLDPAPGAAERAEVVAVIEAEESARKSRRAVAGFDFTFSLPKSASVLWGVADAATQARIAEAHHAAVAEVVAFMEREVAATRSGATSRDGAVAQVEVRGLIATAFDHFDSRAGDPQLHTHVVVSNKVRTLFDGKWRSLDSRPLHAATVALSELHNVIFADHLTRALGVGWERRDRGAHRNPVWAVATVPEELVAEFSSRSRHIDIEKDRLIAEYEAAHGHAPSRETIIRLRQQATLATRPDKEVRPLADLTQEWRTRASRLLGRDATEWAREAVAAERVELLRAEDVPLERIARLGAAVVAAVAEKRTTWTHWNLYAEAARRTMGWRFAATEDRDAITGMIADAAEQASIRLTPPELASSPGAFQRADGTSVFRLRNAARYSGAAVLAAEDRLLARSHEQVAPRLADAIVAHALQPHRGRALGDDQRAALTAIASSGRVLDLLVGPAGAGKTTALRALRRAWEAEHGRGAVVGLAPSAVAAEVLAGDLGIPTENTAKWWQTHRDRGTGFTAGQLVIVDEASLAGTLALDRLVRVAADAGAKVLLVGDPAQLQSVDAGGAFGMLVADRADVPELTDVRRITAAWEKGATRDLRNGRIEAIDTYQAHGRIRAGETERMADA