ggKbase home page

SCNpilot_solid_2_scaffold_137

Search features with annotation key words

Displaying items 181-210 of 223 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_solid_2_scaffold_137_180
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198131..198634
DNA (504bp) protein (168aa)
SCP-like extracellular protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3R1_9BRAD rbh
Cysteine-rich secretory protein family protein {ECO:0000313|EMBL:CEG06823.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipi
allergen V5/Tpx-1 family protein
SCNpilot_solid_2_scaffold_137_181
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

198805..199593
DNA (789bp) protein (263aa)
D-beta-hydroxybutyrate dehydrogenase (EC:1.1.1.30); K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30] rbh
3-hydroxybutyrate dehydrogenase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3R0_9BRAD rbh
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EFI52590.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;
SCNpilot_solid_2_scaffold_137_182
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199613..200923)
DNA (1311bp) protein (437aa)
Multi antimicrobial extrusion protein MatE n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Q9_9BRAD rbh
Multi antimicrobial extrusion protein MatE {ECO:0000313|EMBL:EFI52589.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
polysaccharide biosynthesis protein rbh
SCNpilot_solid_2_scaffold_137_183
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201070..201618)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Q8_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI52588.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
SCNpilot_solid_2_scaffold_137_184
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201615..203303)
DNA (1689bp) protein (563aa)
fadD; long-chain-fatty-acid--CoA ligase FadD (EC:6.2.1.3) rbh
AMP-dependent synthetase and ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Q7_9BRAD rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EFI52587.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NL
SCNpilot_solid_2_scaffold_137_185
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203448..204920)
DNA (1473bp) protein (491aa)
dacA1; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4) rbh
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NNX8_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30816.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_137_186
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205118..206920)
DNA (1803bp) protein (601aa)
Beta-(1-->2)glucan export ATP-binding/permease protein NdvA {ECO:0000256|HAMAP-Rule:MF_01728}; EC=3.6.3.42 {ECO:0000256|HAMAP-Rule:MF_01728};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaprot
ndvA; beta-1,2-glucan export ATP-binding/permease NdvA (EC:3.6.3.42); K06147 ATP-binding cassette, subfamily B, bacterial rbh
Glucan exporter ATP-binding protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Q5_9BRAD rbh
SCNpilot_solid_2_scaffold_137_187
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

207113..207532
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NXA7_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30818.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_137_188
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

207656..208048
DNA (393bp) protein (131aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:
phosphoribosyl-ATP pyrophosphatase 2 (PRA-PH 2) (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Q3_9BRAD
SCNpilot_solid_2_scaffold_137_189
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208110..208691
DNA (582bp) protein (194aa)
DedA family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Q2_9BRAD rbh
DedA family {ECO:0000313|EMBL:EFI52582.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
DedA family rbh
SCNpilot_solid_2_scaffold_137_190
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208809..209318
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Q1_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG06832.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_137_191
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

209610..210476
DNA (867bp) protein (289aa)
Diguanylate cyclase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3Q0_9BRAD rbh
Stalked cell differentiation-controlling protein {ECO:0000313|EMBL:CEG06833.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afi
diguanylate cyclase rbh
SCNpilot_solid_2_scaffold_137_192
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210653..210907)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NXB2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30823.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_solid_2_scaffold_137_193
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211283..211474
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUY2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36238.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-31
resolvase
SCNpilot_solid_2_scaffold_137_trna_2
unknown

Not on your lists

comp(211320..211401)
DNA (82bp)
transferRNA
SCNpilot_solid_2_scaffold_137_194
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211591..212073
DNA (483bp) protein (161aa)
Disulfide bond formation protein DsbB n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3P7_9BRAD rbh
Disulfide bond formation protein B {ECO:0000313|EMBL:CEG06836.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat
hypothetical protein
SCNpilot_solid_2_scaffold_137_195
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212169..212399)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3P6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06837.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_137_196
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

212573..213052
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3P5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06838.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
SCNpilot_solid_2_scaffold_137_197
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213488..214510
DNA (1023bp) protein (341aa)
Beta-ketoacyl-acyl-carrier-protein synthase III {ECO:0000313|EMBL:EFI52566.1}; EC=2.3.1.180 {ECO:0000313|EMBL:EFI52566.1};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobi
fabH2; 3-oxoacyl-[acyl-carrier-protein] synthase FabH (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] rbh
Beta-ketoacyl-acyl-carrier-protein synthase III n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3N6_9BRAD rbh
SCNpilot_solid_2_scaffold_137_198
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214570..215127)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NXC0_AFIFE rbh
HNH endonuclease rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30833.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_solid_2_scaffold_137_199
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215217..216014)
DNA (798bp) protein (266aa)
DNA-3-methyladenine glycosidase II; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] rbh
HhH-GPD family protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3N3_9BRAD rbh
HhH-GPD family protein {ECO:0000313|EMBL:EFI52563.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_solid_2_scaffold_137_200
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

216105..216989
DNA (885bp) protein (295aa)
glutamyl-Q tRNA(Asp) synthetase (EC:6.1.1.-); K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] rbh
Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3N2_9BRAD rbh
Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain {ECO:0000313|EMBL:EFI52562.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afip
SCNpilot_solid_2_scaffold_137_201
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

217036..218307
DNA (1272bp) protein (424aa)
Histidine kinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3N1_9BRAD rbh
Histidine kinase {ECO:0000313|EMBL:EFI52561.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
histidine kinase/response regulator protein rbh
SCNpilot_solid_2_scaffold_137_202
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218240..219124)
DNA (885bp) protein (295aa)
Ribonuclease BN n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3N0_9BRAD rbh
Ribonuclease BN {ECO:0000313|EMBL:EFI52560.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ribonuclease BN family protein; K07058 membrane protein rbh
SCNpilot_solid_2_scaffold_137_203
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

219276..219470
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52559.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
hypothetical protein
SCNpilot_solid_2_scaffold_137_204
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

219644..220216
DNA (573bp) protein (191aa)
ATP:cob(I)alamin adenosyltransferase (EC:2.5.1.17) rbh
ATP/cobalamin adenosyltransferase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M8_9BRAD rbh
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:CEG06858.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af
SCNpilot_solid_2_scaffold_137_205
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

220341..221087
DNA (747bp) protein (249aa)
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M7_9BRAD rbh
Electron transfer flavoprotein small subunit {ECO:0000313|EMBL:CEG06859.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
etfB; electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit rbh
SCNpilot_solid_2_scaffold_137_206
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

221087..222031
DNA (945bp) protein (315aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M6_9BRAD rbh
Electron transfer flavoprotein large subunit {ECO:0000313|EMBL:CEG06860.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia
electron transfer flavoprotein subunit alpha (alpha-etf); K03522 electron transfer flavoprotein alpha subunit rbh
SCNpilot_solid_2_scaffold_137_207
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222123..223022
DNA (900bp) protein (300aa)
hbdA; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] rbh
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKL0_AFIFE rbh
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EKS30842.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis AT
SCNpilot_solid_2_scaffold_137_208
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223105..223296
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3M4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG06863.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch di
hypothetical protein
Displaying items 181-210 of 223 in total

View Taxonomy