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SCNpilot_solid_2_scaffold_90_71

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 74312..74557

Top 3 Functional Annotations

Value Algorithm Source
Phage transcriptional regulator, AlpA n=1 Tax=Afipia sp. 1NLS2 RepID=D6VB11_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 59.0
  • Bit_score: 81
  • Evalue 4.60e-13
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:EFI50088.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 59.0
  • Bit_score: 81
  • Evalue 6.50e-13
prophage CP4-57 regulatory similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 53.0
  • Bit_score: 73
  • Evalue 3.00e-11

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGCAGAAAAGCGACCGTCTCTTTCGTCTCAAATACATCATCTGGCCTCACGGCCCTCTACCAATCTCGGCCGCCTCATGGTGGGCGGGAGTCAAGAGTGGTCGTTTTCCGCCCGGGGTTAAACTTGGGCCGCGTACGACGGCGTGGCGCGGGAGTGACATCGAACAGTTGGTCAATGAGGGCCGCTGGGCGTCCAACGACGACCATCACGACACCTCAGATTCTGCCGGGAGGGACCACCGATGA
PROTEIN sequence
Length: 82
MQKSDRLFRLKYIIWPHGPLPISAASWWAGVKSGRFPPGVKLGPRTTAWRGSDIEQLVNEGRWASNDDHHDTSDSAGRDHR*