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SCNpilot_solid_2_scaffold_90_89

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 91016..91594

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=666684 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 191.0
  • Bit_score: 370
  • Evalue 1.30e-99
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 191.0
  • Bit_score: 342
  • Evalue 6.30e-92
  • rbh
2'-5' RNA ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAX4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 191.0
  • Bit_score: 370
  • Evalue 9.00e-100
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCCTCGCTTATTCACTGGACTTGAGATTCCGCCCGACATCTCCCAATCGCTCTCGATGCTGCGTGGCGGGCTGCCTGGTGGCCGCTGGGTTGACCCCGAAAATTATCATGTCACGCTGCGCTTTATCGGCGACATCGACGATTACGTCGCGCGCGAGATTGCGAACACGCTGGAGCGCGTCGACCGCAAGCCATTCGAGGTGACGGTGCAAGGGCTCTCCAGCTTCGGCAGCAAGAAGCCGCGCGCCGTGGTCGCCTGTATCCAGCCGAGCCGGCCTCTGATGGAACTGCAAGCGGAACTCGAGCGGCTGATGCGCCGCTTCGGGCTCGCTCCCGAAGGCCGGAAATTTATTCCGCATGTTACGCTGGCGCGGTTGCGTGATGCCTCGAGCCGCGATGTCGCCGATTACCTTTCGGTGCGGGGCTATTTCCCGGCGAAAAAATTCGTTGCCTCCCGCTTCGTGCTGTTTTCCTCGCGGGCCTCGGTCGGCGGCGGTCCGTATGTGATCGAGGATTCCTACGCGTTTTCATCCGATGAAACGGATCGCGGCTTCCAGAGGCGATATTCCGTTTTATAA
PROTEIN sequence
Length: 193
MPRLFTGLEIPPDISQSLSMLRGGLPGGRWVDPENYHVTLRFIGDIDDYVAREIANTLERVDRKPFEVTVQGLSSFGSKKPRAVVACIQPSRPLMELQAELERLMRRFGLAPEGRKFIPHVTLARLRDASSRDVADYLSVRGYFPAKKFVASRFVLFSSRASVGGGPYVIEDSYAFSSDETDRGFQRRYSVL*