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SCNpilot_solid_2_scaffold_47_50

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 49642..50034

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 130.0
  • Bit_score: 254
  • Evalue 9.00e-65
DNA-directed RNA polymerase subunit omega (EC:2.7.7.6); K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 130.0
  • Bit_score: 251
  • Evalue 1.30e-64
DNA-directed RNA polymerase subunit omega n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9Z4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 130.0
  • Bit_score: 254
  • Evalue 6.40e-65

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGGCGCGCGTTACCGTCGAGGATTGCATCGACAAGGTCGATAACCGGTTTGATCTCGTGCTGCTTGCCGCGCATCGCGCGCGCATGATCTCGTCCGGCTCCCCGATCACGGTCGATCGCGACAACGACAAGAATCCGGTGGTGTCGCTGCGCGAAATCGCGGACCAGACTATTGCTCCGGAAGACCTCAGGGAAGAACTGGTGCACTCGCTGCAAAAGTTCGTCGAAGTGGACGAACCGGAGCCGGATATGATCCCGCTGATCGGATCGGCCGGTGCGAGCGTCGACGCCGACGACACCGAAGTCGCTGTCGAACGCATGACCGAAGAAGAACTGCTCAAGGGTCTGGAAGGCCTCGCGCCGCCGGAAGAGCAGCCTGAGGAGGACGAATAA
PROTEIN sequence
Length: 131
MARVTVEDCIDKVDNRFDLVLLAAHRARMISSGSPITVDRDNDKNPVVSLREIADQTIAPEDLREELVHSLQKFVEVDEPEPDMIPLIGSAGASVDADDTEVAVERMTEEELLKGLEGLAPPEEQPEEDE*