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SCNpilot_solid_2_scaffold_247_27

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(27534..28505)

Top 3 Functional Annotations

Value Algorithm Source
Putative LysR family transcriptional regulator n=1 Tax=Pseudomonas sp. CFII64 RepID=S6GXE3_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 290.0
  • Bit_score: 257
  • Evalue 1.40e-65
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:CDG85794.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janth similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 296.0
  • Bit_score: 272
  • Evalue 6.00e-70
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 294.0
  • Bit_score: 252
  • Evalue 1.90e-64

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Taxonomy

Janthinobacterium agaricidamnosum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGATTGACGAGCTGAAAGCCCTTCGAGCCGTCATCCAGCATCGGTCTCTAACCGGCGCCGCAGCGGCTCTGCATCTGACCCAATCAGCCATCTCGCGCAGAATTCAGCAACTCGAGGAGACGCTTGGTGGCGACCTGCTGGATAGAACGAGTCGACCGCCAACTCCGACGCCTTTGGGAAATCGCATCTATGAGCGATCTCAATCAATCCTTGTTGCGATCGATCAACTGTTGCTTCTCGCCTCGGAGAATGCAGCCCCCGCAGGAATTCTAAGGATTGGGGTCACGCATGCAATTAGCGATGCCGTCATCGCTGCTACGGCCGGCCGACTGACCGCCGCATTCCCTTTACTCGACTTGCGATTGAGGACAGCGTGGAGTCCGAGCCTGACCGATCTCATTTCGAATGGAGCATTGGATGCCGCCGTTATTCTGTTGCCATCCGGCGGCCGACCGTCACCAGCTGTGGACGGAGAACGCATCGCCTCACTCGAAGTCGTGATTGTTCAGAGCAAGGCTCACCCCACTTTCGCTGGTAAAGTTCGAATGTCGGAGCTTGCCGATCAGCGCTGGATCCTCAATCCGCAAGGCTGCGGATACAGAGCGGAGATTGAACGGGCAATTGGTCTCGTGGGCAAGAATCTCCGAGTGATGATTGATACCTACGGCATGGACATCCAACTCCGGATGATCGCCTCGGGCATGGGGATCGGTGTCATTCCAAAAAAACTGCTTTTGGCCAGCCCGGCGCGCGACGAGTTGGCTATCGTCAACGTGCAAGACTTTAGCGTGACCCTTGATATGTGGGTGGTTCATCCGAGTGAACTCGGGAATCTGAAATCGGCCGTCGAGCTTTTCGTGGCGGCTATCGCCGCAGATATCACCACGCCCAAACCAACGAGCATCACCAAATCCCGCCCACGGAGTTCTCCCAGGAAAGTCAGTCGGAGCCGATCAGGCAAAGTTCGCTAA
PROTEIN sequence
Length: 324
MIDELKALRAVIQHRSLTGAAAALHLTQSAISRRIQQLEETLGGDLLDRTSRPPTPTPLGNRIYERSQSILVAIDQLLLLASENAAPAGILRIGVTHAISDAVIAATAGRLTAAFPLLDLRLRTAWSPSLTDLISNGALDAAVILLPSGGRPSPAVDGERIASLEVVIVQSKAHPTFAGKVRMSELADQRWILNPQGCGYRAEIERAIGLVGKNLRVMIDTYGMDIQLRMIASGMGIGVIPKKLLLASPARDELAIVNVQDFSVTLDMWVVHPSELGNLKSAVELFVAAIAADITTPKPTSITKSRPRSSPRKVSRSRSGKVR*