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SCNpilot_solid_2_scaffold_159_95

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(98086..98787)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V575_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 233.0
  • Bit_score: 428
  • Evalue 4.40e-117
  • rbh
DNA-binding transcriptional repressor AcrR {ECO:0000313|EMBL:CEG08567.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia fe similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 233.0
  • Bit_score: 428
  • Evalue 6.20e-117
putative TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 233.0
  • Bit_score: 373
  • Evalue 6.90e-101
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGGCATTCAAGCGTATGAGCGGCGATTCGCGCCGACGGCAGATTCTGGACGCAGCGAAGCAATGCTTCGCGCAATACGGATTCGCCGGCACCACGACGAGGAAGGTGGCGACCGCCGCCTGTATCTCGGAAGGGCTGCTATTTCGCCATTTTGCGACCAAGGCGGCGCTGCATACCGAAATCCTGTCGGAGGCCTGCGAGGCTGATCCTGACCTCCAGCGGCTGCGTGAGCTTCAGCCCTCGAGCGAGACTCTCTTTATTCTGGTTCGGGAAATGATCATCCATTTCCTCGCGATCAGGACCCTGCCGAACCGCGAGAAGGCGGAACGGCTCCGCCTGACCGCTTCGAGCCATCTCGATGACGGCGAGTTCGCGCGGTTGCTGTTCGGGAAAGTTAGCGACCTGATCGCGCCTTTATTCATTGCCTCGATCGAGAGCGCCGTCGCCGCGGGCGATGCGGTCCCGATCAAAACCAAACCGATCGACTTGTTCTGGTTCGTACATCATCTACTTCACTCGCTCGCGCTGACGCGGCTGCCCGATACGCCTTCGCTCGATTATCCGGGGGATGACGTCCTCGCGAACGAACTAAACGATTTTATCCTGCGCGCGCTCGGAATGAAGGCGGATTTCATTGCCGCCCATCTCGAGAGCGCCGCATCATTCCCAACATCGCAGCATCTTGTTCCGGAAAGCGCCTGA
PROTEIN sequence
Length: 234
MAFKRMSGDSRRRQILDAAKQCFAQYGFAGTTTRKVATAACISEGLLFRHFATKAALHTEILSEACEADPDLQRLRELQPSSETLFILVREMIIHFLAIRTLPNREKAERLRLTASSHLDDGEFARLLFGKVSDLIAPLFIASIESAVAAGDAVPIKTKPIDLFWFVHHLLHSLALTRLPDTPSLDYPGDDVLANELNDFILRALGMKADFIAAHLESAASFPTSQHLVPESA*