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SCNpilot_solid_2_scaffold_172_1

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(241..588)

Top 3 Functional Annotations

Value Algorithm Source
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 115.0
  • Bit_score: 212
  • Evalue 4.50e-52
panD; aspartate alpha-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11] similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 113.0
  • Bit_score: 166
  • Evalue 6.40e-39
Aspartate 1-decarboxylase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Q4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 115.0
  • Bit_score: 212
  • Evalue 3.20e-52

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGCAAGTGACTTTGATGAAAGGCAAGATTCACCGCGCGCGAGTCACAGAAGCGGATTTACATTATGAAGGATCGATTTCGATTGATCGCAATCTTATTGAGGCGGCCAGTTTCCTCATTAACGAGAAGGTCGATATTTTTAACATCGATACTGGCGCCAGATTTTCGACTTATGTCATTGAGGCTCCTGCCGGCTCGGGTGTCATCGGTCTTAACGGAGCTGCCGCGCGTCTGGCGATGACTGGAGACAAGGTCATCATCGTTGCCTATGCCGGCTTCGATAGTAATGAAGCTCGTGGATTTCAGCCTTCTGTTGTCCTCGTCGACGAACAGAACCGACGGATTTAA
PROTEIN sequence
Length: 116
MQVTLMKGKIHRARVTEADLHYEGSISIDRNLIEAASFLINEKVDIFNIDTGARFSTYVIEAPAGSGVIGLNGAAARLAMTGDKVIIVAYAGFDSNEARGFQPSVVLVDEQNRRI*