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SCNpilot_solid_2_scaffold_84_55

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 53699..53992

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0C7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 97.0
  • Bit_score: 185
  • Evalue 2.70e-44
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 97.0
  • Bit_score: 185
  • Evalue 3.80e-44
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 97.0
  • Bit_score: 178
  • Evalue 8.00e-43

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGTCACGGCGCTGCGAGTTGACGGCCAAAGGGCCGCAGGTTGGCCACAGGGTCAGCCATTCGAACATCAAGACCAAGCGTCGGTTCCTGCCGAACCTGTGCAACGTCACACTGATCTCCGAGACGCTCGGCCAGTCGGTGCGACTGAAGGTGTCAACCAACGCACTGAAGAGCGTCGACCACAATGGCGGCCTTGATGCCTTCCTGCTCAAGGCCAACCCGGCCTTCCTTTCGCCCAAGGCCGCTGACCTGAAGCGTCAGATCGAGAAGAAAAAACTCGCCGCAGCGAACTGA
PROTEIN sequence
Length: 98
MSRRCELTAKGPQVGHRVSHSNIKTKRRFLPNLCNVTLISETLGQSVRLKVSTNALKSVDHNGGLDAFLLKANPAFLSPKAADLKRQIEKKKLAAAN*