ggKbase home page

SCNpilot_solid_2_scaffold_86_17

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(12838..14295)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NND9_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 485.0
  • Bit_score: 959
  • Evalue 1.50e-276
  • rbh
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EFI50637.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 485.0
  • Bit_score: 959
  • Evalue 2.10e-276
putative transcriptional regulator; K07110 similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 485.0
  • Bit_score: 916
  • Evalue 4.60e-264
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
ATGCGCACCCCCAGCGAGACGGGCCGAAAACTCTTCGTCGGGCCGCGCTTCCGCCGCCTGCGCAAGCAGCTCAACCTGTCGCAAACCCAGATCGCCGAGGGGCTTGGCCTCTCCCCGAGCTACATCAACCTGATCGAGCGCAACCAGCGCCCGGTGACGGCACAGATGCTGCTGCGCCTCGCGGAGACCTACGATCTCGATCTGCGCGACCTTGCGACCTCCGACGAGGACCGCTTCTTCGCCGAGCTGAACGAGATCTTTTCCGATCCCCTGTTCCGCCAGATCGATCTGCCGAAACAGGAATTGCGCGACCTCGCCGAGCTTTGCCCCGGCATCACCCACGCGCTGCAACGGGTCTACGCCGCCTACACCGAAGCGCGCCGCGGCGAAACGCTGGTCGCGGCGCAGTTCGCCGACCGCGACAAGGGCGGCGGCCACGATTACGAGGCCAACCCGATCGAACGCGTGCGCGATCTGATCGAGGCCAACCGCAATTATTTCCCCGAACTGGAGACCGCCGCCGAGACGCTGCGCGACGAGATCGATACCGATCCGCAGGGCCTGCGCACGGCACTCATCAACCGGCTGCGCGAAAAGCATTCCACCACGGTGCGGATCATGCCGGTGGACGTGATGCGCGAAACGCTGCGGCGCTGGGACCGCCACCGTCGCCAGGTGCTGATCTCCGAACTCGTCGACAGCGCCGGACGCACCTTCCAGCTCGCGATGCAGCTTGGCCTCTCCGAAGCGAATGCGCAGTTCGATTCCATCATCAACCGCGCCGGGCCCCTCGACGACACCACGCGCAAGCTCTACCGCATCACGCTTGCGAATTACTATGCGGCCGCGGTGATGATGCCTTATCAAGCATTCCTGAGCGCGGCGGAAACACTGGGTTACGATCTGCACGTTCTGACGCGGCGCTTTAACGCCGGATTCGAGCAGGTCTGTCATCGCCTTACCACGCTGCAGCGGCCGAATGCGCGCGGCGTGCCGTTCTTCCTGCTGCGGGTGGACAACGCGGGCAACGTCTCGAAGCGATTCTCCTCGGGCACGTTTCCGTTTTCGAAATTCGGCGGCACCTGCCCGCTCTGGAACGTGCACTCCACCTTCGATACGCCGGACCGTCTGCTGCATCAGATTATCGAACTGCCCGACGGCAGCCGCTATTTCTCGATCGCGCAGACGTTGCGCCGCCCCGCTGTACCGTGGCCACATGTACAACCGCGCTTCGCTATCGGGCTCGGCTGCGAAATCCGCCATGCCTCGAAGCTCGTCTATACCGCGGGCCTCGACCTTGACCACGCCGAAGGGACGCCGATCGGCGTCAACTGTCGGCTGTGCGAGCGGGAAAATTGCAGCCAGCGCGCCGAGCCGCCGCTGACGCGCACACTGATTCTCGACGAAACCACCAGGCGCGTGTCATCATTCGCGTTCTCCAGTGCAAGAGACATGTGA
PROTEIN sequence
Length: 486
MRTPSETGRKLFVGPRFRRLRKQLNLSQTQIAEGLGLSPSYINLIERNQRPVTAQMLLRLAETYDLDLRDLATSDEDRFFAELNEIFSDPLFRQIDLPKQELRDLAELCPGITHALQRVYAAYTEARRGETLVAAQFADRDKGGGHDYEANPIERVRDLIEANRNYFPELETAAETLRDEIDTDPQGLRTALINRLREKHSTTVRIMPVDVMRETLRRWDRHRRQVLISELVDSAGRTFQLAMQLGLSEANAQFDSIINRAGPLDDTTRKLYRITLANYYAAAVMMPYQAFLSAAETLGYDLHVLTRRFNAGFEQVCHRLTTLQRPNARGVPFFLLRVDNAGNVSKRFSSGTFPFSKFGGTCPLWNVHSTFDTPDRLLHQIIELPDGSRYFSIAQTLRRPAVPWPHVQPRFAIGLGCEIRHASKLVYTAGLDLDHAEGTPIGVNCRLCERENCSQRAEPPLTRTLILDETTRRVSSFAFSSARDM*