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SCNpilot_solid_2_scaffold_86_71

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 72563..74302

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V955_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 579.0
  • Bit_score: 1100
  • Evalue 0.0
  • rbh
Bacteriophage N4 receptor, outer membrane subunit {ECO:0000313|EMBL:CEG08903.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Af similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 579.0
  • Bit_score: 1102
  • Evalue 0.0
TPR repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 577.0
  • Bit_score: 1000
  • Evalue 2.90e-289
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGATGGTCGCGCCGATCGCATCAGCTGCCTTCGCCGAAACGACACCCACAATCGATAACGGATTGTCGGCTTATCCGACCACGCGTGATCTGCAGGGGCTAAGTCTTGCCGGCAGCTACCTTGCGGCCCGTCATGCCAGCGCGGATCGGGACGCGGGTGTCGCCGCCTCGTTCTATCGCGCAGCGCTTCGCGCCGATCCGAAGAATACCGATCTGCTGGATCGCGCCTTCATTTCCTCCGTTGCCGACGGCGAGATGGATGAGGCCGTCAAGCTCGCAGGCAAGATTCTCGCAACCGACAAGACCAACCGCGTGGCACGGCTGGTCGAGGGTGTTCACGCCCTCAAGCTGAAACGCTACTCGGCGGCGCAGCAGAATTTCAGTCAGTCGGTGCGCGGCCCGATCACCGATCTTGTTGGGACGCTGCTCACGAGCTATGCGATGCAGGGTGCAGGCAACACCTCTACCGCGCTCGCCAATATCGACAAGCTCGCCGGCCCGGAATGGTATCCGATTTTCAAGAACCTTCACGCCGGCCTGATCGACGAACTCGCCAACCGGCAGAAGGATGCCGGGGTCCGTTTTGAAGCGGCCTACAAGCTCGATGACACCGCATTGCGGATCGTTGATGCCTATGGACGCTGGATGTCGCGCAACAAGAGGGCAGCCGACGCGGTGCAGTTGTTCGAGACCTTCGACAAGAAGGCGCCGCGTCATCCCCTGATCGTCGATGCGTTGAAGGAACTGAAGGCCGGCAAGAAGCTGCCGGCGCAGATCGACACGCCGCAATCCGGCGCAGCCGAGGCGCTATACGGCATCGGCTCGTCGCTGACGCGCCGCGGCGGCGAAGACCTCGCGCTGGTGTATTTGCAACTCGCGCTGTATCTGCACCCGAACCATCCGCTCGCGCTGCTGTCTCTCGCTGATCTTTATGAATCGGTGAAGAAGCCGCAGCTCGCAATCAAGATCTACGAGCGCATGCCCGAGAATTCGCCGCTGAAGCGCAATGCGCAGATTCAGATGGCGACCGATCTCGATGCTGTGGATCGCACCGACGAAGCTCTGACAATCCTCAAGTCAGTCACTGCGGAAGACTCCAAGGATGCCGAAGCGTTGATGGCGCTCGGCAATATCGAACGTGCACGCAAGAAGTTTGCTGATTGCAGCGGAACCTATTCCAAGGCGATTGAGGCTTCGGATGCAGCGAAGCCGAATTGGGTGCTGTATTACTTTCGCGGTATTTGCGAGGAGCGCTCCAAGCAGTGGCCGAAGGCAGAGGCTGATCTGAAGAAGGCGCTGGAATTGCAGCCCGAGCAGGCGCACGTGTTGAACTATCTGGGCTATTCGTGGGTCGATCAGGGCATCAATCTGCCTGAAGGCATGGCGATGATCCGCCGTGCTGTCGATCAGCGCCCCGATGATGGTTACATCGTGGATTCGCTGGGCTGGGCATATTACCGCATCGGCGACTATGCCAATGCGGTGAAGACCCTGGAGCGTGCCATCGACCTGAAGCCGGAGGATCCGACCGTCAACGATCATCTCGGCGATGCCTATTGGCGCGTCGGCCGAACGCTGGAGGCGAAATATCAGTGGGCGCATGCGCGCGATCTCAAGCCGGAGGCCGACGAACTGCCGAAGATCGAGGCCAAGATAGAGAATGGCTTGCCGGATTTGCCGACTGGTCCTGCGGCGGCATCCAATGCCAACGACAAGAAGAAAGACGATAAAGGCGGCTAG
PROTEIN sequence
Length: 580
MMVAPIASAAFAETTPTIDNGLSAYPTTRDLQGLSLAGSYLAARHASADRDAGVAASFYRAALRADPKNTDLLDRAFISSVADGEMDEAVKLAGKILATDKTNRVARLVEGVHALKLKRYSAAQQNFSQSVRGPITDLVGTLLTSYAMQGAGNTSTALANIDKLAGPEWYPIFKNLHAGLIDELANRQKDAGVRFEAAYKLDDTALRIVDAYGRWMSRNKRAADAVQLFETFDKKAPRHPLIVDALKELKAGKKLPAQIDTPQSGAAEALYGIGSSLTRRGGEDLALVYLQLALYLHPNHPLALLSLADLYESVKKPQLAIKIYERMPENSPLKRNAQIQMATDLDAVDRTDEALTILKSVTAEDSKDAEALMALGNIERARKKFADCSGTYSKAIEASDAAKPNWVLYYFRGICEERSKQWPKAEADLKKALELQPEQAHVLNYLGYSWVDQGINLPEGMAMIRRAVDQRPDDGYIVDSLGWAYYRIGDYANAVKTLERAIDLKPEDPTVNDHLGDAYWRVGRTLEAKYQWAHARDLKPEADELPKIEAKIENGLPDLPTGPAAASNANDKKKDDKGG*