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SCNpilot_solid_2_scaffold_688_34

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(27025..27975)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium gallicum RepID=UPI00036CD173 similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 295.0
  • Bit_score: 556
  • Evalue 1.90e-155
  • rbh
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAJ94486.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium g similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 300.0
  • Bit_score: 565
  • Evalue 4.40e-158
transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 295.0
  • Bit_score: 551
  • Evalue 1.50e-154
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
TTGCTGTTGGATGTGTTAGATACGGGCTTTGGAAGGCGCACCGCGGCGGTGCCAGATTGCACCATGATCGACTGGGATGACGTTCGCTACTTTCTTGCCGTCGGGCGCGGAGGCTCAGTGCGAGCCGCCGCCGAGCGCCTCGGGGTGAACCACACGACAGTGCTGCGACGCATCGCTCAGCTCGAGGAACGCCTCGGGGCGCACATGTTCGAAAAGCTACCCTCGGGCTACCGCCTGACGGCTGCGGGCGAGGAGGTCCTTGAGCTCGCGAACCAGATGGAAGCGTCGTCGCACCAGCTCGAGACGCGCGTCTTCGGTCGCGACCAGAGCGTGCGCGGGCTTCTGCGGGTGACGTTGGCGCCGACCCTCGCGACACACCTACTCATGCCGGACCTCGCCGATTTTGCGCGTCTGCATCCGGACATCGAGATGGAAATCTTGTCGTCCGGCGAGCTGGCAAATCTGACAAACCGAGATGCCGATGTCGCGATCCGCGTTGTTTACGACCGCAAAACCCTGCCGCTCAATCTTCACGGCCTGAAGGGGCCAGAACTGTTCAGCGGCGTCTACATGTCCCGCGATCGACTGGCGGCGTGGCATGCGGGTGCGCCTGATCCCATCCGGTGGATCGTCATAAGCAGTCATGGCATCCCGGACTGGGTCCGCGAGGGTGAGGTTCGCCCCACAGGGGTTCCGTTCAGGACCACAGACGGCGAGGCGCAGATCGTTGCCGTCCGGCAAGGGCTCGGGATGACGACGCTGCCGTGCTTCGTTGGAGATGCCGACCCACTGCTGGCGAGGGTGCCGGGTACTGACCTGCACATGCATGGAACGCTCTGGCTTCTTACGCAGGGGGAGACACGCAAGACGAAGCGCGTTCGGCTTTTCACCGAGTTCGTATCCCGCAGGCTCGCCATACACGCGCCGCTTCTCGCGGGACTGTCCATATAG
PROTEIN sequence
Length: 317
LLLDVLDTGFGRRTAAVPDCTMIDWDDVRYFLAVGRGGSVRAAAERLGVNHTTVLRRIAQLEERLGAHMFEKLPSGYRLTAAGEEVLELANQMEASSHQLETRVFGRDQSVRGLLRVTLAPTLATHLLMPDLADFARLHPDIEMEILSSGELANLTNRDADVAIRVVYDRKTLPLNLHGLKGPELFSGVYMSRDRLAAWHAGAPDPIRWIVISSHGIPDWVREGEVRPTGVPFRTTDGEAQIVAVRQGLGMTTLPCFVGDADPLLARVPGTDLHMHGTLWLLTQGETRKTKRVRLFTEFVSRRLAIHAPLLAGLSI*