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SCNpilot_solid_2_scaffold_474_28

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 31753..32667

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Oligotropha carboxidovorans RepID=B6JHB1_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 304.0
  • Bit_score: 535
  • Evalue 3.30e-149
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 304.0
  • Bit_score: 535
  • Evalue 1.10e-149
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEI05982.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligot similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 304.0
  • Bit_score: 535
  • Evalue 4.70e-149

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGGATCGCCTCGACGCCATCCGCGCCTTCGTTGCCGTTCTGGACGAAGGCAACCTGACCAAAGCCGCCCTGCGCTTGAACCGCTCGCCGGTCGCCGTGACACGTGCGATTGCGTTTCTCGAGGAGGATGTTGGCACCGAATTGCTCCACCGTACAACACGAACGGTCCGCGTCAGTGAGGCAGGCGAGCGATATGCGATCGTATGCCGCCGCATCCTGAACGATCTGGAAGATGCGAACCTTGCGGCGGTGGGGTTGCATTCCGCTCCTCGAGGCGTCCTCACAATCACCGCACCAGTTTTATTCGGCACAAGAATTCTGCGCCCGGTGATCGACGAATTCCTGGAAGAATACCCGGCAGTAAACATCCGGTATCTTCTCATGGATCGTCAGGTTAATCTGGCCGAGGAAGGCATAGATGTTGCCTTGCGGATTGGGTATCTTCTGAACTCAGGACTGATCGCGACAAAAGTCGGCAGCGTCCGCCGTGTTGTCGCCGCCTCTCCATCCTATCTGAAAGATAGGCCCGCAATTCGAAAGCCACCCGACCTGGCAGCTCATAACTGCATCTCGAACTTCGAGCTCGGGCATGGTGAAGTCTGGACCTTCCCGCCAAGGTCCGGAACAAAAGCCCACCGCAATGTGCGACTGAAGCCACGCCTGAGCGTCAACTCCATTGAAGCCTTGGTTCGCAGCGCTGCTGACGGACGCGGCATTATCCGTGTGCTGTCCTATCAAATTGAAGAAGAAATTCAGAAGGGCCGGTTACAGATATTACTCAAGAGCGCAGAGCCGGAGCCCCTGCCCGTCCACCTGGTCGTGCCCGACGGAAGGGTAGATCTCTCCAAAGTCCGGGCATTTATCGATTACGCAGCTCCCCGCCTCAGAAAGATGTTACGCGCACCTGCTGTTTGA
PROTEIN sequence
Length: 305
MDRLDAIRAFVAVLDEGNLTKAALRLNRSPVAVTRAIAFLEEDVGTELLHRTTRTVRVSEAGERYAIVCRRILNDLEDANLAAVGLHSAPRGVLTITAPVLFGTRILRPVIDEFLEEYPAVNIRYLLMDRQVNLAEEGIDVALRIGYLLNSGLIATKVGSVRRVVAASPSYLKDRPAIRKPPDLAAHNCISNFELGHGEVWTFPPRSGTKAHRNVRLKPRLSVNSIEALVRSAADGRGIIRVLSYQIEEEIQKGRLQILLKSAEPEPLPVHLVVPDGRVDLSKVRAFIDYAAPRLRKMLRAPAV*