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SCNpilot_solid_2_scaffold_502_62

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 59963..61204

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 413.0
  • Bit_score: 786
  • Evalue 1.60e-224
rluC; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.-); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 414.0
  • Bit_score: 746
  • Evalue 4.10e-213
  • rbh
Pseudouridine synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAB2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 413.0
  • Bit_score: 786
  • Evalue 1.10e-224
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGAGCCGGCGTTTCCGAAAACCCCTGGAAAAGAAATCGGTTCGCACCGCCAAGAAAGGCGAAAAGCGCGGCGACAAGCGAGCCAAGCCGTCGTTCGCCAAGAAGGCTTCCGACAAGCGCGGTCCGACCCAGCGCGCGTTCGACAAGCCGGGTGCGCGGTTCGGCGATCAGAAATCGCGCCGCCCGGCAAAGGCCGCGCACGATATGGTTCCCGAGGTGCGGGAGGAGAAGAAGCCCGCGCCGCTTCTGCCGACCAAGGTGCAGACCGTTGTCGTCACCGCCGACGAGAACAACATGCGGGTCGATCGCTTTCTCGAGGCGCGGTTTCCGGGCCTGTCGTTTTCTCACATCCAGCGCATCGTCCGGAAGGGCGAGTTGCGCGTCAACGGCAAGCGCGCCGACAGCAAGGATCGTCTGGAGGAAGGCGACAGCGTGCGTATCCCGCCGCTCAAGCTCGATGCGCCGAAGATTGGCGGTCATCTCTCCGAAGCTGAGGCCAAGACGCTCGAAGAACTTCAGAAGATGATCCTGTTCGAGGACGCCGACGTCATGGTGCTGAACAAGCCTGCGGGGCTTGCGGTGCAGGGTGGCTCCGGCCTCACGCGCCATGTCGATCAGATGCTGGAGGTGATGCGCGATGCCAAGGGTCAGCGCCCGCGCCTCGTGCATCGTCTCGACCGCGAAACTTCCGGCTGCCTCTTGATCGCCAAGACGCGCTTTGCCGCATCGGTGCTGACCGGCTCGTTCCGCCATCGCTCGGCGCGCAAGATCTACTGGGCGCTGGTGGCGGGCGTGCCGAAGCCGAAGCAGGGACGGATTTCGACCTATCTCGCCAAGGAGGAGAACGAGGAGGATTCGATCATGCGCGTCGCCGCTCACGGCGACGAGGGCGCGGCGCATGCCGTGACCTATTATGCGGTGGTCGAGACCTCGGCGCAGAAACTCGCCTGGGTGTCGCTCAAGCCGGTGACCGGCCGCACGCACCAGTTGCGCGCGCACATGGCGCATATCGATCACGCCATCGTCGGCGATCCGAAATATTTCAACAAGGAGAACTGGCAGCTACCCGGCGGGTTACAGAACCGGCTGCATCTTTTGGCGCGCCGTATCGTCATTCCGCATCCGCGCGGCGGGCTGATTGATGTCACTGCGCCATTGCCGCCGCACATGCTGCAATCGTGGAATCTGCTCGGGTTAGAGGCCGGCAGGTTCGATCCGATCGAGGACGCGCCGGAAGAGTAG
PROTEIN sequence
Length: 414
MSRRFRKPLEKKSVRTAKKGEKRGDKRAKPSFAKKASDKRGPTQRAFDKPGARFGDQKSRRPAKAAHDMVPEVREEKKPAPLLPTKVQTVVVTADENNMRVDRFLEARFPGLSFSHIQRIVRKGELRVNGKRADSKDRLEEGDSVRIPPLKLDAPKIGGHLSEAEAKTLEELQKMILFEDADVMVLNKPAGLAVQGGSGLTRHVDQMLEVMRDAKGQRPRLVHRLDRETSGCLLIAKTRFAASVLTGSFRHRSARKIYWALVAGVPKPKQGRISTYLAKEENEEDSIMRVAAHGDEGAAHAVTYYAVVETSAQKLAWVSLKPVTGRTHQLRAHMAHIDHAIVGDPKYFNKENWQLPGGLQNRLHLLARRIVIPHPRGGLIDVTAPLPPHMLQSWNLLGLEAGRFDPIEDAPEE*