ggKbase home page

SCNpilot_solid_2_scaffold_14893_2

Organism: SCNPILOT_SOLID_2_Afipia__34

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: 1987..2589

Top 3 Functional Annotations

Value Algorithm Source
TRAG family protein n=2 Tax=Afipia RepID=D6V0X8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 201.0
  • Bit_score: 410
  • Evalue 8.20e-112
TRAG family protein {ECO:0000313|EMBL:EFI53358.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 201.0
  • Bit_score: 410
  • Evalue 1.10e-111
traG; conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 201.0
  • Bit_score: 392
  • Evalue 7.30e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGTCCGCGACCAAGATTCTCTGGGGCCAGGTCATCACCGTCTTCACAATCGTCCTGCTCGCGATCTGGAGCGCGACGGAGTGGACGGCCTGGCGCCTCGGCTTCCAGCCCCAGCTCGGCCACCCGTGGTTCGAGTTTCTGCATTTCCCGTTCTACCTTCCGCCGGCCTTCTTCTGGTGGTGGTTCGCCTACGACGCCTACGCGCCCGACATCTTCATTCAGGGCGCCTATATCGCCGCCTCGGGCGGCCTCATCGCCGCAGCCGTCGCCATCGGCATGTCGGTCTGGCGCGCCCGTGTGGCGAAGAACGCCGAGACCTACGGCTCGGCGCGCTGGGCGCAGCCGAAGGAGATCGAACGCGCCGGACTGCTGGGGCCCGATGGCGTGGTGCTGGGGCGCTACCAGCGCAGCTATTTGCGTCACGACGGGCCGGAGCATGTGTTGTGCTTTGCGCCGACGCGATCGGGCAAGGGCGTGGGTCTGGTGATCCCGTCGCTCTTGACTTGGCCGGGCTCGGCGATCGTCCATGACATCAAGGGCGAGAACTGGCAGCTCACCGCCGGCTTCCGCGCCCAGCACGGCCGCGTGCTCCTGTTCGATCCG
PROTEIN sequence
Length: 201
MSATKILWGQVITVFTIVLLAIWSATEWTAWRLGFQPQLGHPWFEFLHFPFYLPPAFFWWWFAYDAYAPDIFIQGAYIAASGGLIAAAVAIGMSVWRARVAKNAETYGSARWAQPKEIERAGLLGPDGVVLGRYQRSYLRHDGPEHVLCFAPTRSGKGVGLVIPSLLTWPGSAIVHDIKGENWQLTAGFRAQHGRVLLFDP