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08E140C01_z5_2013_Ig3399_v2_scaffold_9974_4

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Bacteroidetes_42_12

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 11 / 38
Location: 2690..3250

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Bacteroidetes_31_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 178.0
  • Bit_score: 205
  • Evalue 5.20e-50
RNA polymerase sigma factor id=3804331 bin=GWF2_Bacteroidetes_33_38 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 178.0
  • Bit_score: 199
  • Evalue 3.50e-48
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 179.0
  • Bit_score: 192
  • Evalue 1.00e-46

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Taxonomy

GWA2_Bacteroidetes_31_9_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
TTGAATCAGGAAATCAACGACATACACAGGCATTTGGTTGAAGCGTGCAAAGCAGGCAACCGGAAAGCATACAACGAGTTGTACAACGCGTATGCAAAGGCTATGTATAATGTTTGTTACCGGATGATGCGTGATGCTGAAGAGGCAAAGGATATGCTTCAGGAAAGTTTTGTGGATGCATTCCATCGTCTTGAATCGTTCCGGTTTGAGTCAACTTTTGGCGCATGGATAAAGAGAATTGCTGTAAATAAATGCATCAACGCACTGGAGAAACGCAAAGTTGTCTGGGTGCAGAATGAAATACCGGAAACGCATTTTATATCCGACGAATATGAAGGCGTTGACGAAGAAGCCTTACGATATAGTGTTGAACGCGTCAAAAATGCTATGGGTCGTTTGCCGGAAGGGGCAAGGGTCATCTTCTCGCTTTACCTAATTGAGGGCTATGATCATACGGAGATAGCTGAGATTCTTAAAATTTCGGAATCCACATCAAAAACACAATTTATGCGGGCTCGCAATATGGTGAAGGAAATGCTGATTACGATACCAGGGCAGTAG
PROTEIN sequence
Length: 187
LNQEINDIHRHLVEACKAGNRKAYNELYNAYAKAMYNVCYRMMRDAEEAKDMLQESFVDAFHRLESFRFESTFGAWIKRIAVNKCINALEKRKVVWVQNEIPETHFISDEYEGVDEEALRYSVERVKNAMGRLPEGARVIFSLYLIEGYDHTEIAEILKISESTSKTQFMRARNMVKEMLITIPGQ*