ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_22205_4

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Bacteroidetes_42_12

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 11 / 38
Location: 2020..2541

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XL55_LEEBM similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 171.0
  • Bit_score: 189
  • Evalue 3.40e-45
16S rRNA processing protein rimm; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 173.0
  • Bit_score: 176
  • Evalue 5.40e-42
Tax=BJP_IG2103_Bacteroidetes_41_9 similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 174.0
  • Bit_score: 245
  • Evalue 4.20e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2103_Bacteroidetes_41_9 → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 522
ATGGAGGGTTATTTTTACCTTGGTAAAATCCTTAAAGCACATGCCTCGAAAGGTGCCCTGCTAATAAACCTCGATACCGACAGCCCTGAAAATTATACAGAACTGGAATCAGTTTTCGTTCAGATGAACGGACAACTGATTCCTTTTTTTATTGAATCGCTTGAACTGCGGCACAACAACAATGCTGTGGTTTCCTTTGCTGATATAGATGATATTGAACAGGCCTCAATGCTAATCAGTTGTGCGCTGTTTCTCCCTATTTCGATGCTGCCTCCCCTTACCGGAAATAAATTCTATTACCACGAGATTATCGGGTTCAGTATTGAAGATGAGCAGTTTGGCGATGCCGGAATTATTGAAGAAGTTTTAGAATATCCCCACCAGGCGGTATTAAGGGTAATGTTAAAAGGGAAAGAGATACTTATACCCATTACCGACGAGATTATTCAGAAAGTTGACCGTAGCACAAAAACCATCCACACCCGAACTCCCGAAGGGCTGATCGCACTTTATTTGGAGTAG
PROTEIN sequence
Length: 174
MEGYFYLGKILKAHASKGALLINLDTDSPENYTELESVFVQMNGQLIPFFIESLELRHNNNAVVSFADIDDIEQASMLISCALFLPISMLPPLTGNKFYYHEIIGFSIEDEQFGDAGIIEEVLEYPHQAVLRVMLKGKEILIPITDEIIQKVDRSTKTIHTRTPEGLIALYLE*