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08E140C01_z5_2013_Ig3399_v2_scaffold_20655_1

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Bacteroidetes_42_12

near complete RP 46 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 11 / 38
Location: comp(88..648)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily id=3680769 bin=GWF2_Bacteroidetes_35_48 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81 similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 171.0
  • Bit_score: 228
  • Evalue 7.00e-57
RNA polymerase sigma-70 factor, expansion family 1 similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 179.0
  • Bit_score: 149
  • Evalue 9.90e-34
Tax=BJP_IG2103_Bacteroidetes_41_9 similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 176.0
  • Bit_score: 249
  • Evalue 3.20e-63

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Taxonomy

BJP_IG2103_Bacteroidetes_41_9 → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGCAACAGCTTGACCGGGATGAATTTGAAAAACTTTTTCGTGCCAATTTCAAAGGACTGTGTTTCTTTGCGCAGAAGTATGTAAAAGATTTTGAAACTGCCCGCGAAATTGTTCAGGATTCTTTTATCAGCCTTTGGGAAAAGCGCGATACCATTGATGCCAGCCGCCCGGTAAAATCCTACCTCACCACGGTAATCCACAACAAATGCCATAATTACCTGCGCGATAACCGAAAATTCAATCACAAGCTTCTCGAAATTGAAAATCTGCTCGAAATCAGAGATGATGCTTCCAATGATCTGCTTGTTGCAAAGGAACTTAAACTGGCAATTCATGAGGCTATTGAAGAATTACCAGAGAAATGCCGCGAAGTATTTTTGTTAAACCGATATGAAAATCTGAAATACAAGGAAATTGCAGTCAAACTAGGCATTTCGGTTAAAACAGTAGAGACACAGATGTCAAAAGCACTCCAACACCTCAGGATTCGGCTTGCTGAATATATGGTTTTAATCCTTGCAATTTTTACACTTGTAAAATTGATAACAGAGAGTTTCTGA
PROTEIN sequence
Length: 187
MQQLDRDEFEKLFRANFKGLCFFAQKYVKDFETAREIVQDSFISLWEKRDTIDASRPVKSYLTTVIHNKCHNYLRDNRKFNHKLLEIENLLEIRDDASNDLLVAKELKLAIHEAIEELPEKCREVFLLNRYENLKYKEIAVKLGISVKTVETQMSKALQHLRIRLAEYMVLILAIFTLVKLITESF*