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08E140C01_z5_2013_Ig3399_v2_scaffold_4098_4

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Deltaproteobacteria_49_9

near complete RP 47 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38
Location: comp(1565..2182)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, SigZ id=3502113 bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 189.0
  • Bit_score: 180
  • Evalue 2.40e-42
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 185.0
  • Bit_score: 162
  • Evalue 1.30e-37
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 206.0
  • Bit_score: 409
  • Evalue 2.60e-111

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Taxonomy

BJP_S1_SUB10_Syntrophobacterales_50_21 → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGCCAAACAGGAACCGGACTTTAAAAAAATTCACGACACTTATGCGCCGCGAATCAGGCATTACCTGGAAAAACTTGCCGGAGTTGACGAAGCGGATGATCTGACGCAGGAAACATTCGCCAAAGTCAGCCGGTCGCTGAAAAATTTCCGGGGGCAATCCAGCCTCTGGACGTGGCTCTATAAAATTGCCACAAACACCGCCATTGATAGAATCAGAAAAAATAAACTTGCCGGGCATGATCTCGGGCTCGATGTTGCGGAAGAAATGGCGGACCAGAATGTCTGGACGGGAGAAATCCTCGCGTTGGAGAATCATGTCATTCGCAGGGAAATGAACAGTTGTATTCGCGATGTGGTTTCCAGGCTTCCCGAAGCATGCCGGACGGTCATCGTGCTGAGCGAATTTGAAGGCCTGAAAAATGAAGACATCGCCGTCATACTGGGGCTCAAGCTGGAAACAGTCAAGATAAGACTGCACAGGGCCCGACTCAAATTGAAAGAAGCGCTCTCCAAACAATGCATCCTGTATCGGGACGAACGCAATGAGTTTGCCTGTGAGCAGAAGCATGATTCATTCATCGGAAAAGACCGGATACTTTCTTTGATAAAAAAATAA
PROTEIN sequence
Length: 206
MAKQEPDFKKIHDTYAPRIRHYLEKLAGVDEADDLTQETFAKVSRSLKNFRGQSSLWTWLYKIATNTAIDRIRKNKLAGHDLGLDVAEEMADQNVWTGEILALENHVIRREMNSCIRDVVSRLPEACRTVIVLSEFEGLKNEDIAVILGLKLETVKIRLHRARLKLKEALSKQCILYRDERNEFACEQKHDSFIGKDRILSLIKK*