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08E140C01_z5_2013_Ig3399_v2_scaffold_874_11

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Ignavibacteriae_34_10

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(9337..9894)

Top 3 Functional Annotations

Value Algorithm Source
Probable RNA polymerase sigma factor id=2254459 bin=GWB2_Ignavibacteria_35_12 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 186.0
  • Bit_score: 314
  • Evalue 9.60e-83
fecI; RNA polymerase sigma factor Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 186.0
  • Bit_score: 314
  • Evalue 1.40e-82
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 181.0
  • Bit_score: 171
  • Evalue 1.90e-40

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Taxonomy

RIFOXYC2_FULL_RIF_IGX_35_21_curated → RIF-IGX → Bacteria

Sequences

DNA sequence
Length: 558
ATGGATTTAGCATTGCAAATTGAAGAATTATTCAAAAATGATAGAAAGAAATTCCTTGGTTTTATCCGTAAAAGAGTAAGATCACAGGAAGAGGCGGAAGATATATTACAAGACGTATTCACAAATGTGCTTGCTGCATCTAAAAATGTACAAAAGCCAATTGAAAATATCGCATCTTGGGTTTTTACAGCTGTAAGAAACAGAATTATTGACTCTTACAGAAAAAAAAGAGCAGAGGCATTTTCTGACCTCCAAACACCCAAACAACAAGAAGAGGGAATGGACACTTTCGAGCATTTCATCGAGGATGTAGGGGAAGGACCAGAGAGTGATTTGCTAAGAAAAACTATATGGGAAGCAGTCCAAGATGGACTAAAAGAACTTCCAGATGAACAAAGAGATGTGTTTGTTAAAAATGAATTTGAAGGTATTTCGTTTAGAGAAATGTCAGAAGAAACAGGCGTGAATATAAATACTCTTTTAGCAAGAAAGAGATACGCTGTTCTACATTTACGGAAAAAACTAAGCGGTTTATACAATTCATTAAATGAAAACTAA
PROTEIN sequence
Length: 186
MDLALQIEELFKNDRKKFLGFIRKRVRSQEEAEDILQDVFTNVLAASKNVQKPIENIASWVFTAVRNRIIDSYRKKRAEAFSDLQTPKQQEEGMDTFEHFIEDVGEGPESDLLRKTIWEAVQDGLKELPDEQRDVFVKNEFEGISFREMSEETGVNINTLLARKRYAVLHLRKKLSGLYNSLNEN*