ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_1233_5

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Ignavibacteriae_34_10

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 5294..5881

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BSP1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 193.0
  • Bit_score: 234
  • Evalue 7.80e-59
Uncharacterized protein {ECO:0000313|EMBL:ERM80539.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 193.0
  • Bit_score: 234
  • Evalue 1.10e-58
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 189.0
  • Bit_score: 230
  • Evalue 6.10e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodonellum psychrophilum → Rhodonellum → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 588
ATGATAGCAGATATAACAGACAGACAATTAGAGATAATTGAAGCATCAGGTAAGCTACTAACCGAAAAAGGAGTAAGTGGACTTACCATCAAGAATATCGCTAAGGAAATGGAGTTCTCAGAGAGTGCTGTTTACAGACATTTCAAAAGTAAAGAAGATATTATAATTGCAATGCTTAGTTACTTAGCTGAAAACATGAACTTGCGTTTAACCAAGATTTGCAAAAGTGGAGAACCCTCGGTGCAAATATTAGTTGAAGTCTTCCAAAGTCAACTAGACTTTTTCGAAGAGAATCCAAATTTCGTAGTAGCTGTATTTTCAGATGGACTATTCGAAGAGAGTCAAAAAATCAACGCAGCTATACAGAAAATAATGTCAGTTAATATGAAAAACTTAATCCCAGTTGTTAAAGAAGGGCAATCAAGAGGAGAGTTCATAAATACAATGACACCTGAGGAATTGATGCATATAGTAATGGGTTCATTCCGATTACAGATGTATAAATGGAGAATATCAAATATGAATTTCGATATTCAAACAGAAGGAAAAAGAGTAATTAATAACCTTATCACATTGGTAACGCCATGA
PROTEIN sequence
Length: 196
MIADITDRQLEIIEASGKLLTEKGVSGLTIKNIAKEMEFSESAVYRHFKSKEDIIIAMLSYLAENMNLRLTKICKSGEPSVQILVEVFQSQLDFFEENPNFVVAVFSDGLFEESQKINAAIQKIMSVNMKNLIPVVKEGQSRGEFINTMTPEELMHIVMGSFRLQMYKWRISNMNFDIQTEGKRVINNLITLVTP*