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08E140C01_z5_2013_Ig3399_v2_scaffold_1845_9

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Myxococcales_66_8

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 10026..10712

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G4I1_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 225.0
  • Bit_score: 274
  • Evalue 8.00e-71
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EYF02295.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 237.0
  • Bit_score: 282
  • Evalue 5.40e-73
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 225.0
  • Bit_score: 274
  • Evalue 2.50e-71

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
GTGTCCCCGTCCGCGCACGCCCGTCCCAACCTCCGGCTCCTTTCCGGCCAGCCTGAGGAAGACCCGCGCCCACCGCAGTCGGAAGCCACGCCGATTCCCCCCCGATCCCCTGGTCCCTTGGGGGAACTCCCGGATGCCGAGCTCGTGGCCCTCGGGGCACAAGGCAATCGCAAGGCGCTCGAGCTCCTCTATCGCCGCCACGCTCCCTTCGCCATCCACCTGGCTACCCGCATCGAAGGCTCCGCCCGCGACGCCGATGACATCGTTCACGACGCCTTCCTCAAGGCCTTCGAGCGTCTGCGTGAACTCAAAGACCCGGCTGCCTTCCGCAGCTGGCTCGGTTCCATCATCGTTCACGACGTGCGCAGTCAGATGCGACGCGCCCGCCTGATGCGGACCATCGGATTGGTCAGGGCAGGTGACCCCATCGATCTCGATGCGCTCGCTAGCCCCGATGCCGCTCCCTCCGTTCGTGCGCAGATCGCGCAGGTGTACGCACTGCTCCGAACCCAACCCGTCGATGACCGGATCGCGTGGATCCTCCGCGCGGTCGAAGGTCACGACCTCGACAGCGTGGCCCGCTTGACCTCGTGCTCTCTTGCCACAGTCAAGCGCCGCATCGCTCGCATTCAGCAGTTTCTCGACGAGCACTTCGTCGATTCCTATGCCGGGGAGATTGAGCGATGA
PROTEIN sequence
Length: 229
VSPSAHARPNLRLLSGQPEEDPRPPQSEATPIPPRSPGPLGELPDAELVALGAQGNRKALELLYRRHAPFAIHLATRIEGSARDADDIVHDAFLKAFERLRELKDPAAFRSWLGSIIVHDVRSQMRRARLMRTIGLVRAGDPIDLDALASPDAAPSVRAQIAQVYALLRTQPVDDRIAWILRAVEGHDLDSVARLTSCSLATVKRRIARIQQFLDEHFVDSYAGEIER*