ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_1726_7

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Myxococcales_66_8

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(6932..8791)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase alpha chain n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PIP3_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 572.0
  • Bit_score: 271
  • Evalue 1.80e-69
putative lipoprotein similarity KEGG
DB: KEGG
  • Identity: 40.5
  • Coverage: 407.0
  • Bit_score: 297
  • Evalue 1.30e-77
Putative lipoprotein {ECO:0000313|EMBL:AFE03243.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 407.0
  • Bit_score: 297
  • Evalue 5.70e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Corallococcus coralloides → Corallococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1860
ATGGATCGCCTTGAGAGAGGGTGGCCGACCGCCTATGCTATTGGCATGCTTGCGCTTTCGCGCCCAGAGAATGCAGCGCCGCGCTTCTGGCCCCCTTTGCTGTTCGGGATCCTGGGAACGGTGGTTGGCATCGTGGGTTGCGGAGGCGACGAGGGATCCCCTTACGCGCTGCCGCCTGAGGCTGGCCCTATCGAGAGCGGACCGGATGCTCCGACGGACTCTTCGGAAGCAGGGCCGGATGCCCAAACGGATGCGGCGGAGGCCGGGCCGGGGGAGTGCGTACCGAAGACCTGCGGGGACTTGGAAGCCAACTGCGGCTCTGCCCCCGACGGCTGCGGCGGCAAGGTCGAATGCGGCGAGTGCCCGGAGGGCCAGGCGTGCGGTGGCGGCGGGACGAACGTCTGCGGCACGGACGAGTGCACGCCGAAGAGCTGCGTTCAAGTCGACGCACAATGCGGATGGGCTTCCGACGGTTGCTCCTTGGCGATGGATTGCGGCGGGTGCGTGCCTCCCGAAGTGTGTGGGAAAGGCGAAGATCCGAACACCTGCGGATGCTCGCCCAAGACTTGCGCTCAACTGGGTGTGAATTGCGGCACTTTGCCGGACGGCTGTCATGGCACCTTGGACTGCGGCTCGTGCAGCGGAGGTCAGGTATGCGGTGGCGGCGGACCGAACCTCTGCGGGTCGGGGGAATGCGTGGCCAAGTCGTGTTCCCAGCTCGGGGCTTCGTGCGGCTATACGTCGGATGGGTGCAGCCAGGCCTCGTACTGCGGCGATTGTGTCGAACCCAACACGTGCGGGGGCGGCGGCATCATGAACCAGTGCGGCTGCATCGCCAAGTCGTGCTCGCAGCTTGGAGTTTCCTGTGGGACCGTCGACAACGGGTGCGGGGAAGTGAATTGCGGGACCTGCACACCCCCGGACACGTGCGGTGGAGCCGGCGTCGACAACCAGTGCGGGTGCACGTGTTCCTTGCCCCATGCCACCACCGACTGCCTCGCTGGCGTCTGCACCGTCAAACAATGCGACCCAGGATGGGGGGACTGCAACGGCGACCCGACCGACGGTTGCGAAGTCGATCTCGACACCGACCCCGAGCACTGCGGCGGCTGTGGAAGCGGCTGCTCCGTGCCCCATGGAACCGCGGGGTGCTCCGAGGGCACCTGCGGAATTGCTTCCTGCAACGCGGGGTGGGCGGATTGCGATGGGTCGTTGAACAACGGCTGCGAAACCAATACCGCCACCGACGCGGCCAACTGCGGCGGGTGCGGAAAGCAGTGCTCCACTCCCCCCAACACCACGGACGTCGGCTGCGCCGAAGGCAACTGCACAGTCTCCACCTGCTCCAGCACCTACTACGATCAGAACGCTAGCTTCAGCGACGGGTGCGAGTGCAAGAGCGATACGATTGCCGCCACGTGCGATTCCGCCAAAGTGTTGGCGAACTACACGACCGATGTCGTGGTGAGACCGTCGGCGACCACCTTCTACAACATCGTTCCGACGGGCGACCGGGATTGGTTCACGGGGACGTTCACGACGTACGCGAATTGCACGTCGCGGCCGAGGATCGAGCTGGTAGATTCGAGCGGGTTGCTGAGGATGAAGGTGTATAACGCCAGCTCGTGCTCGTCGACGACGGGGTATGCGTGCAGCTCGTCGGAAGGCGGCGACGCGACGAAAGGCATCCGCACGTGGGACTTCGGCCACTCGACCACGTGTGCGAACAACGCCAGCATCGATCCGACCCCGGCTACGGGCACCTACTTCAAGCAGTCGACGAGCTTTCGCATCGAGGTCTACTCCACGGGTTCGAGCACGACCTGCCTGCCCTACCAGCTTCGGTTCAGCCGGTACTAG
PROTEIN sequence
Length: 620
MDRLERGWPTAYAIGMLALSRPENAAPRFWPPLLFGILGTVVGIVGCGGDEGSPYALPPEAGPIESGPDAPTDSSEAGPDAQTDAAEAGPGECVPKTCGDLEANCGSAPDGCGGKVECGECPEGQACGGGGTNVCGTDECTPKSCVQVDAQCGWASDGCSLAMDCGGCVPPEVCGKGEDPNTCGCSPKTCAQLGVNCGTLPDGCHGTLDCGSCSGGQVCGGGGPNLCGSGECVAKSCSQLGASCGYTSDGCSQASYCGDCVEPNTCGGGGIMNQCGCIAKSCSQLGVSCGTVDNGCGEVNCGTCTPPDTCGGAGVDNQCGCTCSLPHATTDCLAGVCTVKQCDPGWGDCNGDPTDGCEVDLDTDPEHCGGCGSGCSVPHGTAGCSEGTCGIASCNAGWADCDGSLNNGCETNTATDAANCGGCGKQCSTPPNTTDVGCAEGNCTVSTCSSTYYDQNASFSDGCECKSDTIAATCDSAKVLANYTTDVVVRPSATTFYNIVPTGDRDWFTGTFTTYANCTSRPRIELVDSSGLLRMKVYNASSCSSTTGYACSSSEGGDATKGIRTWDFGHSTTCANNASIDPTPATGTYFKQSTSFRIEVYSTGSSTTCLPYQLRFSRY*