ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_4252_4

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Myxococcales_66_8

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(5274..5597)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor beta-subunit n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GUU1_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 106.0
  • Bit_score: 144
  • Evalue 4.50e-32
Integration host factor beta subunit {ECO:0000313|EMBL:EYF03796.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 106.0
  • Bit_score: 146
  • Evalue 1.70e-32
ihfB; integration host factor beta-subunit; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 106.0
  • Bit_score: 144
  • Evalue 1.40e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGACGAAGAGTGAGCTTGTCGAGTCCATCGCGGCGCGTGCGGAGCTGAGCAAGGCACGGGCGGAAATGGTGGTCAACTGCGTGTTCGACGCCATGACCGAGGCCCTACGAGGCGGGGAGGGCGTCGAGATTCGTGGTTTCGGCAGCCTCAAGGCACGGGCGCACAAGTCCTATCAGGGCCGCAATCCGCGCACCGGAAAAGCCGTGAGCGTGCCCCCCAAGCTTCGCCCCTTCTTCAAGGTCGGCAAGGAGCTCAAGGAGTTGGTCAACGCGAGCCGCGAGCTGGGTAGCATCAAGGACGGCAGCGATAGCGACGAGACCTGA
PROTEIN sequence
Length: 108
MTKSELVESIAARAELSKARAEMVVNCVFDAMTEALRGGEGVEIRGFGSLKARAHKSYQGRNPRTGKAVSVPPKLRPFFKVGKELKELVNASRELGSIKDGSDSDET*