ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_4019_5

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Myxococcales_66_8

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: 5071..6066

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 336.0
  • Bit_score: 325
  • Evalue 8.00e-86
Pseudouridine synthase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y3B0_SORCE similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 336.0
  • Bit_score: 325
  • Evalue 5.70e-86
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 336.0
  • Bit_score: 325
  • Evalue 1.80e-86
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGTCCAAGCCCGCCGGTCGCTTCACGTTCGTCGTCGGACCGGCCCATCGATCCCAACGCCTCGACACCGTGGTCGTGAGCCTGCTTCGCGACGCCGGCCGTGAGGTCTCCCGCAGCACCCTTCGCCAGTGGATGGATGAGGACCGCGTGCTCGTCGACGGCGTGGCGGCGAAGGCCGCGTCCCGCCCGGCCGTCGGCGCCACGATCGAGGTCGATCCCGCACCCCCGCCTCCTTCCGGGGCGGAGCCAGACACGTCGGTCACCTTCCAAGTCCTCCACCAGGACGACCACCTGTTGGTGATCGACAAGCCTGCCGGTCTCGTCGTCCACCCGGCGCGAGGCCACCTCGACAAAACCCTCGTCAACGGTCTGCTCGCCCTCGATTGCTTCGACCCGTCGGTGGTCGATGGCGAGGACCCGGACCCCGACGCGATCCTGCGTCCCGGCATCGTTCACCGCTTGGACAAGGACACCAGCGGTGTGCTCGTCGTGGCCCGCACCGGGCGCGCGAGGGAGGGGCTCAAGGACCTGTTCGCTCGCCACGACATCGACCGCGAGTACCAGGCTGTGGTCGTGGGTCGCGCCGCCACCGCCACCTACGACACGCCCCACGGAAGACACCCGACCCATCGCCTGAAGTTCACGACCCGAAACCCCGCCGCCGCCCGTCGCGCCGTTACCCACGTCGTCGTGGAGGAAGCGCTCGCAGGCGGGATCGCGACGCGCGTGACGTGTCGGTTGGAGACCGGGCGCACGCACCAGATCCGGGTTCACCTGTTCGAAGCCGGGGGAACACCCGTGTTGGGGGACGCGCTCTACGGGCCGAGGCCTTCGCACCCGCTGCTTCGACTGGCGGAGCAAGCGCTCGGCAGACACTGGCTGCACGCGGGAGTGCTCGGCTTCGTCCATCCCGTGACCCGGGAGCGCATGCGCTTCTCGTCCCCGCTGCCCGACGAGCTCGTCTCCTGCCTCGAGACGCTGCGCCGCGGATCGTGA
PROTEIN sequence
Length: 332
MSKPAGRFTFVVGPAHRSQRLDTVVVSLLRDAGREVSRSTLRQWMDEDRVLVDGVAAKAASRPAVGATIEVDPAPPPPSGAEPDTSVTFQVLHQDDHLLVIDKPAGLVVHPARGHLDKTLVNGLLALDCFDPSVVDGEDPDPDAILRPGIVHRLDKDTSGVLVVARTGRAREGLKDLFARHDIDREYQAVVVGRAATATYDTPHGRHPTHRLKFTTRNPAAARRAVTHVVVEEALAGGIATRVTCRLETGRTHQIRVHLFEAGGTPVLGDALYGPRPSHPLLRLAEQALGRHWLHAGVLGFVHPVTRERMRFSSPLPDELVSCLETLRRGS*