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08E140C01_z5_2013_Ig3399_v2_scaffold_7456_4

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Myxococcales_66_8

near complete RP 45 / 55 MC: 5 BSCG 45 / 51 MC: 5 ASCG 13 / 38 MC: 1
Location: comp(5079..5453)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L102_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 132.0
  • Bit_score: 88
  • Evalue 5.80e-15
RNA polymerase sigma 70 subunit, RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 132.0
  • Bit_score: 88
  • Evalue 1.80e-15
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 132.0
  • Bit_score: 88
  • Evalue 8.10e-15

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Taxonomy

Thermomicrobium roseum → Thermomicrobium → Thermomicrobiales → Thermomicrobia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 375
ACCGCCAGTGAGCAGCACGTGGCAGCAGCTTCGGCCATGTCCGTGGACCGCCTCCGCGAGGTCCAGCAGGGCGTGAGCGACGCGGTGTCCCTCGACGCGTCCGACCGCGAAATCGGAGAGCCGTCCCCCGACGCCGAGCAACTGCTATGCATGGCAGACCGTCGACGCGTGGTGCGCGAGCAGGTGGCGACTCTCGAGGAGCGTGAGCAACGCGTGCTGTCGCTTCGCTTCGGTCTGGACACGGACGAAGAGGTCAGTCGGGACGAGGTGGCGAAGGTGTTCTGCTTGACTGGGGAGCGCATCCGCCAGCTAGAGAATCAGGCCCTTCAGCGGTTGCAGCACCCATCGCGCGCGGGCATGCTCCGCGCCGTGTGA
PROTEIN sequence
Length: 125
TASEQHVAAASAMSVDRLREVQQGVSDAVSLDASDREIGEPSPDAEQLLCMADRRRVVREQVATLEEREQRVLSLRFGLDTDEEVSRDEVAKVFCLTGERIRQLENQALQRLQHPSRAGMLRAV*