ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_430_20

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Clostridiales_39_8

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(20501..21421)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 304.0
  • Bit_score: 372
  • Evalue 1.50e-100
  • rbh
Pseudouridine synthase n=2 Tax=Desulfotomaculum RepID=F6B457_DESCC similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 304.0
  • Bit_score: 372
  • Evalue 4.90e-100
  • rbh
Tax=BJP_08E140C01_Clostridiales_46_19 similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 295.0
  • Bit_score: 382
  • Evalue 6.70e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_Clostridiales_46_19 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 921
ATGGAAAAAAATATCTTTATTGTCGATAACGAATCTCAAGGATTAAGGTTAGATGTTTTTCTCTGTCAAAAGCATAATGAGCTCAGCCGCACACAGGCACAGAGAATTATTGATAATAAGCAGGCTTTAGTTAATAAAGAACATGAGAAGGCTAGCTATCGTTTAGAAACTGGGGATGAGGTTATATGTGAGATTCCAGATCCTCAGCCACTAGAGGTTGAGGCTGAAAATATTCCGCTTGATATAATATATGAGGACACTGATCTTTTGGTTGTAAATAAACCACAGGGTATGGTAGTTCATCCTGCTAACGGTAACTATAATGGGACATTGGTTAATGCTCTGCTCTACCACTGTCGTGATTTATCAGGTATTAATGGTGTTCTACGACCAGGTATAATTCATCGTATAGATAAAGATACTTCTGGTCTGATCTTAGTAGCAAAAAATGATAGAGCTCATCAGAATTTATCTCAGCAATTAAAAGAACACTCCGTAAAAAGGATTTATATCGCACTCCTCCATGGTATCGTACAGGAGCCTGGAGGTATAATTGAGGCACCCATCGGACGAAGCTTAAAGGATAGACAGAAAATGGCGGTTGTCTCAAAAAATAGTAAGGAGGCAGTGACAGAGTACTTAGTATTAGAAAGATTGGGTGAGTATACACTGGTAGAGTGTAAGCTTAGAACAGGACGTACACATCAGATACGAGTACATATGGCCTTTATTAACCATCCGGTGGTGGGTGATCCTAAATACGGTCATAAAAAAGAGAAACTTGAACTTAAAGGGCAGGCACTTCATGCCAGAACGATAGGCTTTGCACATCCGCGAAAGGGTGATTGGCTCGAGTTTTCAGTTGCGCCACCACCAATCTATTTGAGGATACTTAAAGAACTGGGTAGTAATTTTGAATGA
PROTEIN sequence
Length: 307
MEKNIFIVDNESQGLRLDVFLCQKHNELSRTQAQRIIDNKQALVNKEHEKASYRLETGDEVICEIPDPQPLEVEAENIPLDIIYEDTDLLVVNKPQGMVVHPANGNYNGTLVNALLYHCRDLSGINGVLRPGIIHRIDKDTSGLILVAKNDRAHQNLSQQLKEHSVKRIYIALLHGIVQEPGGIIEAPIGRSLKDRQKMAVVSKNSKEAVTEYLVLERLGEYTLVECKLRTGRTHQIRVHMAFINHPVVGDPKYGHKKEKLELKGQALHARTIGFAHPRKGDWLEFSVAPPPIYLRILKELGSNFE*