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08E140C01_z5_2013_Ig3399_v2_scaffold_1167_20

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Clostridiales_39_8

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 21346..23064

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LV86_CLOB8 similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 478.0
  • Bit_score: 555
  • Evalue 7.70e-155
  • rbh
Sigma-54 dependent transcription regulator {ECO:0000313|EMBL:KAJ52007.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 464.0
  • Bit_score: 579
  • Evalue 4.10e-162
sigma-54 dependent trancsriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 478.0
  • Bit_score: 555
  • Evalue 2.40e-155
  • rbh

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Taxonomy

Clostridium tetanomorphum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1719
TTGAACTCCATACTAGGTATTGAGGAAGTATTAGATAAGACATCCTTTGTTGGCGTTATATTCATTACGAGTACTAAATTAGTAGCGGATTATAATAAGGAAGCAATTCGTATGTTGAGTTTAGGGGCCGCAGAGTATCGAGGTCAACCTGTGGATTCCATAATAGATAATTCAAAATGGCAGGTAATCTTTAATCAAAATGTTGGCAATACAACGGGAAAAGTAGAACATCAAGGAAAAGTACTAGATTTTGAATATCTTCAATTTAAAAATAGTGTTGATGAAGTATCTGCAGCTATTATAATTAATGATGTGAGTGTCTATGAAAAGGAAATTGAGCTATTAAGACCACCCCACGGAATATGGAGTAACATTGATGACATCATTGAATCCTCCTATGATGGGATATATATTACCGACGGTGAAGCAAACACGCTAAGAATAAACAAAGCCTATGAACGGATTACCGGGTTAAAAAGGGAAGAGATACTCGGTAAGAATATGATAGATTTAGTCAAGGAAGAGTACATTTCTGAATCTGCAACCTTGTTGGTTCTGCAGAACAAAAGAATAAATACTATTCATCAGAACTTTAAAACTGGCAAAAAGGCACTTGTTACAGCAACGCCTATATTTGATAAAGTCGGGAAAATTATGATGGTCGTTACAAATGTCAGAGATATTACTGAGCTATATGAATTGAAAGAGGAGCTTGAAGAAAAGGAACGCTTAGCAAAAAAATACTATTTGGAAATTCAACAAATAAGAATGCAGCTTTTAAACAGCGAAGATATAATAGCAGAGGATATAAAAATGCTACATGTAATGCAAATTGCTAAAAAGGTGGCATTTACAGATACTACAGTAATTTTGTTGGGTGAGACCGGTGTGGGGAAGGAAGAAATAGCTAAACTAATCTATAAAAACAGTTTAAGGAGAGACAAGCAGTTTATTAGCATCAATTGTGGAGCAATGCCGGAAAGTCTTATAGAATTAGAGATGTTCGGCTATGAAAAGGGCTCATTTACCGGAGCAAGTAGGGAAGGGAAACTAGGATTATTTGAAGTTGCCGATGGAGGGACGGTATTCTTAGATGAGATTGCGGAGCTTAGTCCGGTTATGCAAACTAAGTTGTTAAGAGTTTTGCAGGAACATGAGATCAAGAGAATAGGTGGGGTTACCTCAATAAAAGTTGATGTTAGGATTATAGCAGCTACAAACAGGAACTTAGAAGAAATGGTCAATCAAAATAAATTTAGAAAAGACCTTTATTACAGGTTAAATGTGATACCCATTACTGTACCGCCTTTAAGAGAACGACAGCAGGATATAATTCCTCTGATCAGATATTTTCTTTCAGAAATTAATAATAAATACAAATTAAAAAAGAGTTTAGGGGCAGACGTGCTAGAATACCTTTGTGAGTACGAATGGCCAGGAAATGTAAGAGAGCTTAAGAACATAATCGAGAGAGTAGTTGTGATGAGTGCTCAAGATATTATAACTAAAGAAGACCTGCCTAAACAAATACAGGTTTTGTTTGAAGAAAAGATTTTTTCATCTGATGAAATAGTGGCCTTGAAGGATGCGGTAAACAAGGTTGAAGAGCAGCTAATTAATAAAGCATATGAAAAATATGGTAGTGTAAGAGCTGCCGCAAAAGCATTAAATATCGACCCGGCAACATTTGTTCGAAAAAGAAAAAAACACGCTAAGTGA
PROTEIN sequence
Length: 573
LNSILGIEEVLDKTSFVGVIFITSTKLVADYNKEAIRMLSLGAAEYRGQPVDSIIDNSKWQVIFNQNVGNTTGKVEHQGKVLDFEYLQFKNSVDEVSAAIIINDVSVYEKEIELLRPPHGIWSNIDDIIESSYDGIYITDGEANTLRINKAYERITGLKREEILGKNMIDLVKEEYISESATLLVLQNKRINTIHQNFKTGKKALVTATPIFDKVGKIMMVVTNVRDITELYELKEELEEKERLAKKYYLEIQQIRMQLLNSEDIIAEDIKMLHVMQIAKKVAFTDTTVILLGETGVGKEEIAKLIYKNSLRRDKQFISINCGAMPESLIELEMFGYEKGSFTGASREGKLGLFEVADGGTVFLDEIAELSPVMQTKLLRVLQEHEIKRIGGVTSIKVDVRIIAATNRNLEEMVNQNKFRKDLYYRLNVIPITVPPLRERQQDIIPLIRYFLSEINNKYKLKKSLGADVLEYLCEYEWPGNVRELKNIIERVVVMSAQDIITKEDLPKQIQVLFEEKIFSSDEIVALKDAVNKVEEQLINKAYEKYGSVRAAAKALNIDPATFVRKRKKHAK*