ggKbase home page

08E140C01_z5_2013_Ig3399_v2_scaffold_1193_23

Organism: 08E140C01_Z5_2013_Ig3399_Hor_167_2013_Clostridiales_39_8

near complete RP 51 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 22114..23241

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=2 Tax=Desulfitobacterium hafniense RepID=B8FTY1_DESHD similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 369.0
  • Bit_score: 607
  • Evalue 6.50e-171
  • rbh
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 84.6
  • Coverage: 369.0
  • Bit_score: 607
  • Evalue 2.10e-171
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 369.0
  • Bit_score: 607
  • Evalue 9.20e-171

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfitobacterium hafniense → Desulfitobacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1128
TTGAAAACTGAAAAAGAATTAGAACAACTGAAAATTGATGGCGTCAAAAACCTTATCCAAAAGGGTAAAAAGCGAGGAGTCTTAACCTATAATGAAATCATTTTAGCATTACAGGGAATGGAAATGACTCCGGACCAAATAGATGAGGTGTATGAACAATTAAACGCTATGGGAATAGATGTTGTTCCTGCTTCCAGTGATATTGTTTCATTGGAGGAAAACACGGATGATGAAGAGATCGATGTAGCCTCCGATAGTGAAAACGAGGTCGAAATAGACCTTTCAATTCCAGAAGGTGTTGGGATTGATGATCCTGTTCGGATGTACCTTAAGGAAATTGGCAGAGTACCCCTACTTTCTGCAGAAGAGGAAGTAACCTTGGCTAAGGCTATGGAGATGGGGGATGAGGAGGCTAAACGCCGCCTGGCCGAAGCTAATTTGCGCTTGGTTGTTAGTATTGCTAAGCGTTATGTTGGACGTGGCATGCTGTTCCTTGATCTAATACAGGAAGGTAATCTGGGTTTGATAAAAGCCGTGGAGAAGTTTGACTATCGTAAGGGTTATAAATTTAGCACCTATGCTACGTGGTGGATCAGGCAGGCAATCACAAGAGCTATTGCTGACCAGGCCAGAACAATACGTATACCTGTGCATATGGTTGAAACCATCAACAAGCTGATACGAGTTTCACGTCAGCTCTTGCAAGAATTGGGACGCGAACCTATCCCGGAAGAAATAGCAACAGAAATGGATATCTCAGTGGAGCGAGTCCGAGAAATTCTTAAAATCGCGCAAGAACCTGTTTCTTTGGAAACTCCCATAGGGGAAGAAGAGGATAGCCACCTCGGAGATTTTATTGAAGATGAAGATGCACCGGCCCCTGCCGAAGCCGCCTCCTTTATACTTCTGAAAGAACAGCTCGAAGAGGTTTTAGAAACGCTAACCCAAAGAGAAGAGAAAGTACTTAGACTGCGTTTTGGATTAGATGATGGACGAGCGCGTACTTTAGAAGAAGTAGGACAGGAATTTGGCGTTACACGTGAAAGAATTCGTCAGATTGAAGCCAAAGCTTTGCGCAAATTGCGGCATCCTAGTCGAAGCCGTAAATTAAAAGACTACCTGGATTGA
PROTEIN sequence
Length: 376
LKTEKELEQLKIDGVKNLIQKGKKRGVLTYNEIILALQGMEMTPDQIDEVYEQLNAMGIDVVPASSDIVSLEENTDDEEIDVASDSENEVEIDLSIPEGVGIDDPVRMYLKEIGRVPLLSAEEEVTLAKAMEMGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPIPEEIATEMDISVERVREILKIAQEPVSLETPIGEEEDSHLGDFIEDEDAPAPAEAASFILLKEQLEEVLETLTQREEKVLRLRFGLDDGRARTLEEVGQEFGVTRERIRQIEAKALRKLRHPSRSRKLKDYLD*