ggKbase home page

Ig3397_v2_scaffold_7572_2

Organism: BJP_Ig3397_Hor_194_2013_Burkholderiales_65_39

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(4908..5021)

Top 3 Functional Annotations

Value Algorithm Source
putative hemolysin-type calcium-binding region id=5083833 bin=GWF1_Burkholderiales_GWF1_66_17 species=Pseudomonas mendocina genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 38.0
  • Bit_score: 67
  • Evalue 3.20e-09
Tax=BJP_08E140C01_Burkholderiales_65_30 similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 38.0
  • Bit_score: 70
  • Evalue 7.00e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_Burkholderiales_65_30 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 114
GTGGTGATCTCGGCGGTTGGGGTAGATACCCTGATCGACATCGGGGCTGACAGCATCACGCTGGTGGGTGTCAACGCCGCCACGGTGACCCAACAGGACTTCATCCTCTCCTGA
PROTEIN sequence
Length: 38
VVISAVGVDTLIDIGADSITLVGVNAATVTQQDFILS*