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Ig3397_v2_scaffold_542_8

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(4554..5918)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family id=3749480 bin=GWB1_CP_36_13 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 454.0
  • Bit_score: 596
  • Evalue 3.10e-167
  • rbh
two component, sigma54 specific, transcriptional regulator, Fis family; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 464.0
  • Bit_score: 400
  • Evalue 6.00e-109
Tax=GWB1_Spirochaetes_36_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 454.0
  • Bit_score: 596
  • Evalue 4.40e-167

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Taxonomy

GWB1_Spirochaetes_36_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 1365
GTGAGCCGAATCCTGGTAATCGATGATGAAAAAAATGTGCACTACTCCTTTAAGCGGGTCTTCAAGGATTTGGAGATTATTTCGGCTTTTTCCGCCGAGGAGGCTTTGGCGCTTTTGGGCAAAGATAAGCAGTTTGCTTTGATTATATCGGATATCAAGATGCAGGGTATGTCGGGGCTTGACCTCCTGGATGAGCTTAAAAAACAGGAAGTGCCCATCCCGGTAGTGATTATTACCGCCCACGGCACCCTGGAAAACGCTATCAATGCCATCAAGCAGGGGGCTTATGATTATCTGATCAAGCCTTTTGATTTTCAAAAGCTTAAATCGGTAATTTATTCAGCGCTCAGTTTGCCCAGCGAACGCACACTCAAGTCTGAAGAGGTGGATGAATCGGGAACCCAGCGGTTTCTAATCGGCAATTCGGCCATGATGCAGGATGTGTATAGGGAAATTGCCAAGGTAGCTCAGAAGGATATCACTGTCTTGATCACCGGGGAAAGCGGTACGGGGAAGGAAATGGTGGCCAAGGCGATCCACTATTACAGCACCCGAAAAAGCGAGCCCTTCGTGGCAGTCAATTGTGGGGCTATTCCATCGGAACTAATTGAAAGTGAGTTGTTTGGATTTGAAAAAGGCGCTTTTACCGGGGCTCACAAAAAAACCAGCGGAAGGTTTCAGCAGGCCCACGGCGGGACTTTGTTTTTGGATGAGGTAGGGGAACTGCCCCTGCATCTGCAGGTGAAGATACTTCGGGCCCTGCAGGAAAGGGAAATAACCCCCCTGGGAGCCTATGAATCCCAGAAGGTCGATGTGCGTATCATCGCCGCCACCAACCGGGATTTGAAAGAAGAGATCAAGGCCGGGAATTTTCGGGAGGATCTGTTTTACCGGCTGAATGTGGTGCGTATTCATCTGCCTCCGCTGCGGGACCGAAAAGATGATATTCCATTTTTGATTGACTTTTTTCTCCTCAATATAAAAAGAATGCATGATTTAAAGATCGTGAGCTTTTCCGAAGAAGCCATGCAAAAAATTATGCACTATAATTTTCCCGGCAACGTGCGGGAGTTGGAAAATATCGTTACCCGGGCCGCGGTGAGTTCCAACTCGGAGATTATCCAGGACGAGGATATTGATCTGGATTTTTCCCAGGAGTATTTCACTACTAAAATGGAACGGAACCTGGAAAATGTGATTCGGGTGCTCTATGAGCGGGAGATCAAAGTGGACGCCTTTCTGGAAAAAGTGCTCCTGGAAACCCTGATGAAAATTTTCAACTATAATCAAAGCAAAGCCGCTGATTATCTGGAAATTAACCGCAATACCCTGCGCAAGAAACTGCAGGATTATGAGCTGCTTTAA
PROTEIN sequence
Length: 455
VSRILVIDDEKNVHYSFKRVFKDLEIISAFSAEEALALLGKDKQFALIISDIKMQGMSGLDLLDELKKQEVPIPVVIITAHGTLENAINAIKQGAYDYLIKPFDFQKLKSVIYSALSLPSERTLKSEEVDESGTQRFLIGNSAMMQDVYREIAKVAQKDITVLITGESGTGKEMVAKAIHYYSTRKSEPFVAVNCGAIPSELIESELFGFEKGAFTGAHKKTSGRFQQAHGGTLFLDEVGELPLHLQVKILRALQEREITPLGAYESQKVDVRIIAATNRDLKEEIKAGNFREDLFYRLNVVRIHLPPLRDRKDDIPFLIDFFLLNIKRMHDLKIVSFSEEAMQKIMHYNFPGNVRELENIVTRAAVSSNSEIIQDEDIDLDFSQEYFTTKMERNLENVIRVLYEREIKVDAFLEKVLLETLMKIFNYNQSKAADYLEINRNTLRKKLQDYELL*