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Ig3397_v2_scaffold_3739_7

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(4867..5682)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor id=2686381 bin=GWB1_CP_36_13 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 274.0
  • Bit_score: 396
  • Evalue 1.70e-107
  • rbh
RNA polymerase sigma-28 subunit FliA/WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 260.0
  • Bit_score: 311
  • Evalue 3.80e-82
Tax=GWB1_Spirochaetes_36_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 274.0
  • Bit_score: 395
  • Evalue 5.20e-107

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Taxonomy

GWB1_Spirochaetes_36_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 816
TTGGAATATCAGAATCAGGATTTAATTAATCTATCTGCCGAAGAAGAGCTCTTACTCTGGGAAAATTATAAAAAAACCGGCAGTTTAGAGATCAGGGAAAAGCTCATTTTAAAATATGCTCCCCTGGTAAAGTATGTGGCTGGAAAAGTAGCGATTGGAATGCCCAAAAAAATCGAATTTGACGATTTGGTGGGATATGGTATTTTTGGATTATTGGATGCCATTGAAAAATTTGATCCTGATCGCAACACAAAATTTAAAACCTACGCCATTACCCGTATCCGCGGGGCCATTTTTGATGAATTACGCTCCATAGACTGGGTACCCCGAACGGTCCGCCAAAAGGCTAAACAATTGGAAAAGGCCATGCTCGAATTGGAAGAAAAAAATGAGCGGACGCCCACCGATGCCGAAATCGCTGAGGTTCTGGAAATCAGTGAGAAAGAACTGCAAAAACTCTATTTGACTCTAAGCTCCACCACGGTCACTTCTGTTCAGGATTCCGTTTATTCGGAAAACAGCGACAATGAAAAAAACACTATTGTAAACACCATAGAAGCCTCCCCTCACTACAATCCTGAAATGATTCATGAGCGGCAGGAAATCAAAAAAATGATCGCTCAGGTCATTGAAGAACTTTCTGAAAAAGAAAAACAAGTGCTCATCCTCTATTATTACGAGGATCTAACTCTCAAAGAAATTGGAGAAGTACTAGAAGTCACCGAATCCCGAGTCTCCCAGCTTCACACCAAATCCATCTACAAGCTTCGCGCCAAACTAAAAAAATTGCAGAAAAAGATCGGTAAAAATCAATAA
PROTEIN sequence
Length: 272
LEYQNQDLINLSAEEELLLWENYKKTGSLEIREKLILKYAPLVKYVAGKVAIGMPKKIEFDDLVGYGIFGLLDAIEKFDPDRNTKFKTYAITRIRGAIFDELRSIDWVPRTVRQKAKQLEKAMLELEEKNERTPTDAEIAEVLEISEKELQKLYLTLSSTTVTSVQDSVYSENSDNEKNTIVNTIEASPHYNPEMIHERQEIKKMIAQVIEELSEKEKQVLILYYYEDLTLKEIGEVLEVTESRVSQLHTKSIYKLRAKLKKLQKKIGKNQ*