ggKbase home page

Ig3397_v2_scaffold_5137_8

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(6151..6705)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 188.0
  • Bit_score: 178
  • Evalue 2.00e-42
Ribosomal RNA large subunit methyltransferase E id=3731189 bin=GWB1_CP_36_13 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 185.0
  • Bit_score: 254
  • Evalue 9.00e-65
Tax=GWB1_Spirochaetes_36_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 185.0
  • Bit_score: 254
  • Evalue 1.30e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_Spirochaetes_36_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 555
TATTCAAAGAAGGCCAAGCAGGAAGGCTATCATGCCCGCAGTGTTTACAAGTTGGAAGAAATAGATAAAAAATATCAGGTTTTCAGAAATGGGCTCAAAGTTCTGGATCTGGGAGCCTATCCCGGCTCCTGGAGTCAGTATGCCCTCAAAAAAGTGGGACCCACGGGCAAAGTGGTGGGTATCGATATTGAAAATATTGAAACACCCCTGGGTTCCAATTATACTTTTTTGCACCGGAGTATTCTGGAAGCCGAGCTGGATTTAAGCCTCTTTGCCCCCTTTGATGTGGTGCTTTCGGATATGGCGCCCAGGACCACGGGCATCAAAGGACAGGATGTTTATTTGTCCCTGGAACTGACCGCCATGGCCGCTGCATGTGCCGGTAAGTACATGAAGCACAATGGGGTTTTTATCGCCAAGATTTTCCAGGGTGAGGATTTTGACGAATTTTACAAGGATCTGAGGACCCGGTTTGCCAAGATGAAATCCATCAAACCCGAGGCCGTGCGGGCCCAAAGCAAGGAAATCTACGTGATAGCCTGGGGGCTAAAGTAG
PROTEIN sequence
Length: 185
YSKKAKQEGYHARSVYKLEEIDKKYQVFRNGLKVLDLGAYPGSWSQYALKKVGPTGKVVGIDIENIETPLGSNYTFLHRSILEAELDLSLFAPFDVVLSDMAPRTTGIKGQDVYLSLELTAMAAACAGKYMKHNGVFIAKIFQGEDFDEFYKDLRTRFAKMKSIKPEAVRAQSKEIYVIAWGLK*