ggKbase home page

Ig3397_v2_scaffold_7305_2

Organism: BJP_Ig3397_Hor_194_2013_Spirochaetes_44_7

near complete RP 50 / 55 MC: 4 BSCG 49 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(136..528)

Top 3 Functional Annotations

Value Algorithm Source
TolR protein id=3834617 bin=GWB1_CP_36_13 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3 similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 130.0
  • Bit_score: 146
  • Evalue 1.40e-32
TolR protein; K03559 biopolymer transport protein ExbD similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 135.0
  • Bit_score: 71
  • Evalue 2.40e-10
Tax=GWB1_Spirochaetes_36_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 130.0
  • Bit_score: 146
  • Evalue 2.00e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_Spirochaetes_36_13_curated → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 393
ATGAAAATTAAACTTCGAAGAAGGGAAGAGCATGAAACTCCCGCCTCGGCCATGAGTGACATCGCTTTTCTCCTGATCGTGTTTTTTATTGTTATCGCCGTTTTTGCCGTGAAGGAAGGTTTTATCATGAACCTGCCCGAAAGGGAAAAAATCGTCAAAAAGGCCTCCAAGGATATCCTTAAAGTACAGTTAGCTCCTAATCTGATCTTGATCTCTGGAGACAAGGTTGAAAAGGAAACTTTTAAGGAAACCCTTAAAAAAGCCAAAGACGGAAAGCGGGTGGTGATCCTGGAAGTCAAGTCCGCCACTTTATACAAAGAGGTGATCTTTGTGCTCGATCAATTTGCCCAGCTGGATATCCGGGAATTCGCCATGCGCAAATGGGAAGGGTAG
PROTEIN sequence
Length: 131
MKIKLRRREEHETPASAMSDIAFLLIVFFIVIAVFAVKEGFIMNLPEREKIVKKASKDILKVQLAPNLILISGDKVEKETFKETLKKAKDGKRVVILEVKSATLYKEVIFVLDQFAQLDIREFAMRKWEG*