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SCNpilot_expt_500_bf_scaffold_5937_7

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 7117..7500

Top 3 Functional Annotations

Value Algorithm Source
TrbC-like protein n=3 Tax=Pseudomonas aeruginosa RepID=U8YSE5_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 130.0
  • Bit_score: 220
  • Evalue 7.60e-55
Type IV secretory pathway protein {ECO:0000313|EMBL:ACD39031.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 130.0
  • Bit_score: 220
  • Evalue 1.40e-54
trbC; Conjugative transfer protein TrbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 91.3
  • Coverage: 127.0
  • Bit_score: 219
  • Evalue 5.40e-55

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGACGCAGATGCACGTTCCTGCTTTCCGTGTTTCCGTGAATCCGGCTTCGCCTCTTGCGCGTCTGCGCCACCTGGCCGGGCCGGCCCGCCGTGGCCTGCTGCTGGCCGCGCTGATGCTGTTCCTGGCAGGGACGGCCCAGGCCGCCGGTTCCTCGATGCCGTGGGAAAGCCCGCTGCAATCTATCCTCGAATCCATCCAGGGGCCGGTGGCGCGCATCGTCGCGGTGATCATCATCATCGCCACGGGCCTGGCGCTCGCCTTCGGCGACACGTCGGGCGGTTTCCGCAAGCTGATCCAGATCGTCTTCGGTCTGTCCATCGCCTTCGCGGCTTCGAGTTTCTTCCTGTCGTTCTTCAGCTTCTCGGGTGGGGCCGTCGTATGA
PROTEIN sequence
Length: 128
MTQMHVPAFRVSVNPASPLARLRHLAGPARRGLLLAALMLFLAGTAQAAGSSMPWESPLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*