ggKbase home page

SCNpilot_expt_500_bf_scaffold_5937_12

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 12370..13056

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein n=2 Tax=Comamonadaceae RepID=A9BTR6_DELAS similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 227.0
  • Bit_score: 450
  • Evalue 1.40e-123
Conjugal transfer protein TrbF {ECO:0000313|EMBL:GAO21052.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 227.0
  • Bit_score: 451
  • Evalue 6.70e-124
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 227.0
  • Bit_score: 450
  • Evalue 4.40e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGCGATTCAAACGACCGCAGGTGCGCTACGCCGATACGCCGCAGCCTGCCACCCCGTACCAATCCGCGGCGCAAGTCTGGGACGAGCGCATCGGTTCGACCCGCGTGCAGGCCAGAAACTGGCGTTTCATGGCCTTTGGCTGCCTCACGCTGGCGGTGTTGATGGCGGGCGGCCTGGTCTGGCGCTCGGCCCAGTCCATTGTCACGCCTTATGTCATCGAGGTGGATAACGCGGGCCAGGTGCGTGCTGTCGGCGAAGCCGCCACGCCCTACAAGCCGAGCGATGCGCAGATCGCCTACCACCTCGGCCGCTTTATCGGCCTGGTGCGCTCGCTGTCCATCGATCCCATCGTTGTGCGGCAGAACTGGCTCGATGCCTACGACTACACGACCGACAAGGGCGCCGTGGTGCTCAACGAGTACGCCCGCGTGACCGATCCGTTCGCGCGCATCGGCAAGGAGTCGGTGACGGTGCAGATCACCAGCGTAACCCGCGCCAGCGACACGTCTTTCAACGTGCGCTGGACGGAGACGCGCTTCGTCAATGGCGTGCTGGATCGCACTGAACGCTGGAACGCAGTGATTTCCACGGTGCTGCAAGCCCCGCGCACCGAGCAGCGCCTGCGCAAGAACCCTCTGGGCATCTACGTCAACGGCCTGTCGTGGAGCCGCGAACTGGAAGAATGA
PROTEIN sequence
Length: 229
MRFKRPQVRYADTPQPATPYQSAAQVWDERIGSTRVQARNWRFMAFGCLTLAVLMAGGLVWRSAQSIVTPYVIEVDNAGQVRAVGEAATPYKPSDAQIAYHLGRFIGLVRSLSIDPIVVRQNWLDAYDYTTDKGAVVLNEYARVTDPFARIGKESVTVQITSVTRASDTSFNVRWTETRFVNGVLDRTERWNAVISTVLQAPRTEQRLRKNPLGIYVNGLSWSRELEE*