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SCNpilot_expt_500_bf_scaffold_21495_8

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 5196..6140

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 301.0
  • Bit_score: 498
  • Evalue 8.60e-138
rpoB; RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 293.0
  • Bit_score: 493
  • Evalue 6.20e-137
DNA-directed RNA polymerase subunit beta n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037C01C9 similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 299.0
  • Bit_score: 508
  • Evalue 5.90e-141

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGGCTGAAAATTTCACCGGTCGCAGGCGGATGAGGAAGCGGTTCGGCTCGATCGCCGAAGTGGCGGAGATGCCGAACCTGATCGAGGTGCAGAAGAGCTCCTACGATGACTTCCTGATGGTCAAGGAGCCGGCCGGCGGCCGTCCTGAGACCGGCCTGCAGGCGGTGTTCAAGTCGGTGTTCCCGATTTCGGACTTCTCGGGCAAGGCCACGCTCGAGTTCGTCCGCTATGATTTCGATCCGCCGAAGTTCGACGTCGACGAGTGCCAGCAGCGCGACATGACGTACGCGGCCCCGCTGCGTGTGAAGCTGCGCCTCATCGTGTTCGATATCAACGAGGAGACCGGCTCGCGCTCGATCAAGGGCGTGAAGGAGCAGGACGTCTATATGGGCGACATGCCGTTCATGACTCAGAACGGCACCTTCATCATCAACGGCACCGAGCGCGTTATCGTCTCGCAGATGCACCGCTCGCCGGGCGTCTTCTTCGACCATGACCGCGGCCGCACGCACGCCTCCGGCAAGCTGCTGTTCGCAGCCCGCATCATTCCCTATCGCGGCTCCTGGCTCGACTTCGAGTTCGACGCCAAGGACGTCGTCTACGTGCGTATCGACCGTCGCCGCAAGCTGCCGGTGACGACGCTGCTTTATGCGCTGGGCCTCGACGACGAGCAGATCCTCGGCACGTTCTACGGCTCCATCCTCGTGCGTCAGACCAAGAAGGGATGGACTATGCCGTTCATCCCCGAGAAGATGCGCGGCGTGACGCCCGTCGCCGACATTGTCGATGCCAAGTCCGGCACCGTCGTCGCGAAGGCTGGCGAGAAGGTCTCCGTGCGCCGTGCGCGCGAGCTCGCCGAGAGCGGCGTCAAGGAAGGCGTGCCGAAGGACGAGGCTGCAAAGCTCAAGAAGCAGCTCGAGGACCAGGGCGCGACCGTCGAGATC
PROTEIN sequence
Length: 315
MAENFTGRRRMRKRFGSIAEVAEMPNLIEVQKSSYDDFLMVKEPAGGRPETGLQAVFKSVFPISDFSGKATLEFVRYDFDPPKFDVDECQQRDMTYAAPLRVKLRLIVFDINEETGSRSIKGVKEQDVYMGDMPFMTQNGTFIINGTERVIVSQMHRSPGVFFDHDRGRTHASGKLLFAARIIPYRGSWLDFEFDAKDVVYVRIDRRRKLPVTTLLYALGLDDEQILGTFYGSILVRQTKKGWTMPFIPEKMRGVTPVADIVDAKSGTVVAKAGEKVSVRRARELAESGVKEGVPKDEAAKLKKQLEDQGATVEI