ggKbase home page

SCNpilot_expt_500_bf_scaffold_23975_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 86..1405

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L5B6_9BACI similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 440.0
  • Bit_score: 610
  • Evalue 1.50e-171
  • rbh
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:EGL83451.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 440.0
  • Bit_score: 610
  • Evalue 2.20e-171
matK; Maturase K Intron maturase similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 441.0
  • Bit_score: 570
  • Evalue 5.60e-160
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caldalkalibacillus thermarum → Caldalkalibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1320
ATGGCAACGAAACTAGAAGGAATAGCAGTAAAAGCTCGGGCTGAGAAAGACCTGAGATTTACATCTTTATGCCATCACATTACACGAGAGCTGATAGGGGAAAGTTTAAATCGTATCTCCCCAAAGAGCGCTCCTGGAATAGATGGTATAACTGTAAGTCAAGCTAAAGAAGACTTTCATCTGTGGGTTGAGGAGATGCTCCGATCGATCCATAGAAAAGGATACAAAGCTCCTGCAGTAAAACGCGTCTGGATTCCCAAACCAGGGAAATCAGAAGAACGCCCTTTAGGAGTTCCTTGTATCGCTGATCGTGCCCTGCAGAGGAGTGTTACAAAAGTATTGGAAGCTATCTATGAGCAGGACTTCTTGGCCTGTTCCTTTGGTGGAAGACCAAACCTAAGTGCACACCATGCATTAGCCACTTTCAATGAAATTGTATCAGGAAAGTACGTTAACTGGGTACTAGAGGCAGACTTAAAGAATTTCTTTGGAAGCTTAAGCCAGCAATGGTTGATTAGGTTTGTTGAGCACCGAGTAGGAGACCCAAGAATACTTAGCTTGATTAGGCGATGGCTTAAAGCAGGCATCTTGGAAAATGGAGAGATCCATCTAAGTGACAGTGGAGTTCCCCAAGGGGGCTCCATTAGCGTACTTCTAAGCAACATTTACCTACATTATGTCTTAGATCTTTGGTTCGAAAAGGTTGTGAAACCTAAACTCAAGGGAGAGGCATACTTAATAAGGTACATTGATGACTTTGTTGTATGCTTTCAATATCGCTCAGATGCTCGAGAGTTCCAAGAAGCTCTTCAGAAACGGCTTAAGAAATTCTCTTTAGAGCTTGCACCAACTAAGACCAGGCTCGTTGAATTTGGGAGATTTGCACAAAGGAATGCACTAACAAGTAGGAAGAAAACGGAAACAGTCTACTTCCTCGGGTTTACGCACTTTTGCGCAAGAAATCTCAAAGGAAACTTCATGGTTGGGCGTAAGACAGAGAAGACAAGGTTTAAAAGAAGCATAGAAAAGATCTATCAACTTCTAAAGGACATTAGGCACTTCTCAATCAAAGCTCAAAGAGTAAGGATTAACCAAGTCCTTCGAGGACATTATGCTTATTATGGAATGGGGGGCAATACTGAATCCATCAATAGGATTCACAGACTTACCCAGAAGTATTGGCGTAAAATGCTGAATAGCCGTGGCCGAAAGAGGCATATAACTTGGGAAAAGTTTAATAAGTTGCTTGCTCTTTATCCTTTGCAGGCTCCGAGGCAATGGATGACATTTAAGAGGATGAAAGCAATTGCGGTACTGTAA
PROTEIN sequence
Length: 440
MATKLEGIAVKARAEKDLRFTSLCHHITRELIGESLNRISPKSAPGIDGITVSQAKEDFHLWVEEMLRSIHRKGYKAPAVKRVWIPKPGKSEERPLGVPCIADRALQRSVTKVLEAIYEQDFLACSFGGRPNLSAHHALATFNEIVSGKYVNWVLEADLKNFFGSLSQQWLIRFVEHRVGDPRILSLIRRWLKAGILENGEIHLSDSGVPQGGSISVLLSNIYLHYVLDLWFEKVVKPKLKGEAYLIRYIDDFVVCFQYRSDAREFQEALQKRLKKFSLELAPTKTRLVEFGRFAQRNALTSRKKTETVYFLGFTHFCARNLKGNFMVGRKTEKTRFKRSIEKIYQLLKDIRHFSIKAQRVRINQVLRGHYAYYGMGGNTESINRIHRLTQKYWRKMLNSRGRKRHITWEKFNKLLALYPLQAPRQWMTFKRMKAIAVL*