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SCNpilot_expt_500_bf_scaffold_28945_3

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(697..1242)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 180.0
  • Bit_score: 273
  • Evalue 2.60e-70
rRNA small subunit methyltransferase H; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 182.0
  • Bit_score: 238
  • Evalue 1.20e-60
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG03_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 182.0
  • Bit_score: 238
  • Evalue 3.90e-60

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Taxonomy

Devosia limi → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
CTGGCCAACCTGCTGTTTGCCTTCGGCGAGGAGCGCAAGTCGCGCCGGATCGCCCATTCGATCGTCGCGGCGCGGGCGAGCCAGCCGATCACGACGACGACCCAGCTTGCGAAACTCATCGAGAAGACCATCGGCCGGAAGCCGGGCGACGCGCACCCCGCGACCCGCAGCTTCCAGGCCCTGCGCATTGCCGTGAACGGCGAGTTCGAGCAACTGGTCGAGGGGCTGTTCGCCAGCGAGCGCCTCCTGACCGAAGGTGGGCGGCTGGCGGTCGTCACCTTCCATTCGCTCGAGGACCGGATCGTGAAGCGCTTCTTCGACCCTGAGAAGGGCGCACCGACCCAGTCGCGGCACCTGCCGCAGGTCACGCAAGAGGCCTCGCGCTGGTCGCCGGTGGCCAAGGCGCGCAAGGCGTCCGACGCCGAGACCGCGCGCAACCCTCGGTCCCGTTCGGCCACCCTCCGCTCCGGCGTTCGTACGGCCGCCGCGGCGCGTTCCCTCAGCTATGCCGGGCTCGGCGTGCCGATGTCGCGGGGTGCAGCATGA
PROTEIN sequence
Length: 182
LANLLFAFGEERKSRRIAHSIVAARASQPITTTTQLAKLIEKTIGRKPGDAHPATRSFQALRIAVNGEFEQLVEGLFASERLLTEGGRLAVVTFHSLEDRIVKRFFDPEKGAPTQSRHLPQVTQEASRWSPVAKARKASDAETARNPRSRSATLRSGVRTAAAARSLSYAGLGVPMSRGAA*