ggKbase home page

SCNpilot_expt_500_bf_scaffold_29033_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: comp(1..678)

Top 3 Functional Annotations

Value Algorithm Source
preprotein translocase subunit SecD n=1 Tax=Methyloferula stellata RepID=UPI0003698F1B similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 226.0
  • Bit_score: 259
  • Evalue 2.60e-66
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 226.0
  • Bit_score: 253
  • Evalue 7.70e-65
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 226.0
  • Bit_score: 253
  • Evalue 3.40e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGCTTCGCTTCTCCCGCTGGAAGGTTGCCTCGGTCATTCTGCTGACGGTGCTGACGTTCCTCATCATCGCACCGAGTTTCCTCACCAAGGAAACGCGTGACGAATACGCCAAGCACTTGCCGAAATGGGTGCCTTTCCAGAGCGTCGTCCTCGGCCTCGACTTGCAGGGCGGGGCGCATGTGGTGTTCGAAGTTGATTCCAACGACATTCTGCGCACCCAGCTCGAGAATCTGCGCGACGATGTGCGCCGCATTCTACGTGAAGAGCGCGTGCGCAGCCTCGCCGGCACGGTCGCCGTCTCCGGCCGCACGATTCAATTGCGCATCAATGATGCCGCCGAGCGCGCTCGCGTTCTGACCAAGCTGCGCCAGCAAGCACAGCCAGGCGGCGTCAATGCGCTTGGCCTCGCCACGCCGGCTATCTTTGACGTCCGCGACAATTCCGACGGCCAGATCGTCCTGTCGATGACGGAAGCGGGCACGCAGGAACGCATTCGCCGCGCCGTCGACCAGACCATTGAAGTCATCCGTCGCCGTGTTGACTTCGGCGGCACGACCGAACCGAATATTCAGCGCCAGGGCGCCGATCGCGTGCTGGTGCAGGTGCCGGGCCTGCAAGACACCAAGCGCCTGATCGATCTGCTCGGCGCCCAGGCGAAACTCGAATTTCGCCTCGTC
PROTEIN sequence
Length: 226
MLRFSRWKVASVILLTVLTFLIIAPSFLTKETRDEYAKHLPKWVPFQSVVLGLDLQGGAHVVFEVDSNDILRTQLENLRDDVRRILREERVRSLAGTVAVSGRTIQLRINDAAERARVLTKLRQQAQPGGVNALGLATPAIFDVRDNSDGQIVLSMTEAGTQERIRRAVDQTIEVIRRRVDFGGTTEPNIQRQGADRVLVQVPGLQDTKRLIDLLGAQAKLEFRLV