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SCNpilot_expt_500_bf_scaffold_26909_1

Organism: SCNpilot_expt_500_bf_step10_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 15 / 38 MC: 13
Location: 3..272

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023756CB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 174
  • Evalue 4.40e-41
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 89.0
  • Bit_score: 174
  • Evalue 1.40e-41
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 174
  • Evalue 6.20e-41

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 270
GGTGCCAACACCGCCCCCATCGAAGCCGCCATGCAGGCCGGCTTGCGCGACGTGGTCAAGGACATTCTCGACGGCCTCACGCCGCGCGAAGCCAAGGTGCTGCGCATGCGCTTCGGTATCGAGATGACCAGCGACCACACGCTGGAAGAAGTGGGCAAGCAGTTCGACGTGACCCGCGAGCGCATCCGCCAAATAGAAGCCAAGGCGCTGCGCAAGCTCAAGCACCCCAGCCGCTCGGACAAGCTGCGCAGCTTCATCGACTCGCTGTAA
PROTEIN sequence
Length: 90
GANTAPIEAAMQAGLRDVVKDILDGLTPREAKVLRMRFGIEMTSDHTLEEVGKQFDVTRERIRQIEAKALRKLKHPSRSDKLRSFIDSL*